Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC090971.4-201ENST00000560291 1800 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 SAMMSON-210ENST00000641260 1308 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC139769.1-204ENST00000472297 1931 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.2-201ENST00000362330 96 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 RNU6-266P-201ENST00000364225 107 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 RN7SKP227-201ENST00000364445 330 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 RNA5SP479-201ENST00000364858 117 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 DPH3P2-201ENST00000422618 250 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 UBE2V1P4-201ENST00000425374 344 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 HMGB1P27-201ENST00000431429 603 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 NUTF2P7-201ENST00000453086 375 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 RNU7-138P-201ENST00000459479 64 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC092451.1-201ENST00000480211 153 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 DEFB109F-201ENST00000491870 277 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC110794.1-201ENST00000505816 425 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC093840.1-201ENST00000511599 336 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 RN7SKP21-201ENST00000516503 220 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 RNU6-635P-201ENST00000516651 102 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC069113.1-201ENST00000517763 267 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC084783.1-201ENST00000565846 910 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 AC012119.1-201ENST00000603184 222 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 CDC27P3-201ENST00000635418 1910 ntBASIC5.78□□□□□ -1.48
USP17L3A6NCW0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
USP17L3A6NCW0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.77□□□□□ -1.48
USP17L3A6NCW0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RNU6-288P-201ENST00000363690 104 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 SET-203ENST00000372688 801 ntTSL 2 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RNU6-14P-201ENST00000384630 106 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RNU1-82P-201ENST00000390851 165 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RPL7AP73-201ENST00000413490 353 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC140479.3-201ENST00000418944 1126 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC097713.2-201ENST00000430199 356 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 USP9YP30-201ENST00000430729 455 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AL645568.3-201ENST00000433683 316 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 CKS1BP5-201ENST00000434172 273 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RPS11P1-201ENST00000451072 473 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC245028.2-201ENST00000458673 253 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 NIP7P2-201ENST00000485801 544 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 ENPP7P11-201ENST00000505915 627 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RNA5SP464-201ENST00000516251 108 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RNU6-1271P-201ENST00000517049 105 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC091516.1-201ENST00000549191 703 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC126177.3-201ENST00000551839 688 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AL161713.1-201ENST00000555538 145 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 MIR5692A1-201ENST00000580523 69 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC100812.1-201ENST00000607622 580 ntBASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms