Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 Z85995.1-201ENST00000415547 335 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AL356095.1-201ENST00000417217 199 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RPL17P36-201ENST00000420302 549 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RAC1P6-201ENST00000423911 575 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC092047.1-201ENST00000424997 240 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC073614.1-201ENST00000438690 650 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 PIGFP3-201ENST00000441918 722 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC006011.1-201ENST00000442758 349 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AL360221.1-201ENST00000445989 335 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 NANOGP10-201ENST00000453325 895 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 MTND4LP3-201ENST00000468320 276 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 HMGN2P13-201ENST00000476476 274 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AL132838.2-201ENST00000492041 314 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RN7SL604P-201ENST00000492589 296 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC010587.1-201ENST00000505809 469 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 SNORD59.2-201ENST00000516873 68 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 CASP1P1-201ENST00000526345 212 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AP003122.4-201ENST00000530980 758 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AMZ2P1-203ENST00000565833 850 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC025627.2-201ENST00000576220 160 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC053481.4-201ENST00000583164 216 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC080013.6-201ENST00000606185 215 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU4-89P-201ENST00000607443 133 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AL391813.2-201ENST00000609113 322 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC091304.9-201ENST00000612091 226 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC006338.1-201ENST00000618453 749 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 MTND1P37-201ENST00000636562 264 ntBASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGB3Q9Y5G1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 TEX21P-201ENST00000447107 1476 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU1-64P-201ENST00000365443 163 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 Y_RNA.553-201ENST00000384670 102 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 EI24P2-201ENST00000397776 1076 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AL589872.1-201ENST00000426602 288 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 HMGB1P27-201ENST00000431429 603 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AL512844.2-201ENST00000433990 593 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 OR4C10P-201ENST00000434991 931 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AL122001.1-201ENST00000457027 370 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 RBM43P1-201ENST00000476891 1081 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 MTND1P3-201ENST00000484956 952 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 ARL2BPP4-201ENST00000506854 471 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC114797.1-201ENST00000514003 728 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC010342.1-201ENST00000514047 877 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 SNORA31.3-201ENST00000516029 96 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU7-51P-201ENST00000516560 62 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU6-352P-201ENST00000516908 107 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AP003181.2-201ENST00000528941 181 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 RN7SL600P-201ENST00000581811 299 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 RN7SKP299-201ENST00000606679 301 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC103710.2-201ENST00000609912 942 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC034102.8-201ENST00000615146 484 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC090582.1-201ENST00000636321 199 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms