Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-1120P-201ENST00000362988 108 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 Y_RNA.159-201ENST00000363674 87 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RNA5SP175-201ENST00000364275 119 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RNA5SP513-201ENST00000364648 118 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-701P-201ENST00000384059 107 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RNU1-13P-201ENST00000384499 162 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 MTCO3P40-201ENST00000392516 676 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 NDUFS5P1-201ENST00000405668 289 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 U3.42-201ENST00000408746 214 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-648P-201ENST00000410190 107 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RNU2-39P-201ENST00000410604 198 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 SNRPFP1-201ENST00000414761 252 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 MTATP6P18-201ENST00000417994 673 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 MTCO2P19-201ENST00000427513 598 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RPL23AP30-201ENST00000432419 501 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RPS7P7-201ENST00000463499 571 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 RPL35P6-201ENST00000490024 372 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC079382.1-201ENST00000493346 557 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC020593.1-201ENST00000507399 299 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 MTND4LP31-201ENST00000514859 294 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AP003034.1-201ENST00000534621 422 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AL359212.1-201ENST00000556608 614 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC034105.4-201ENST00000568304 277 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 BNIP3P22-201ENST00000593399 556 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AP003465.2-201ENST00000602571 373 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AL391646.1-201ENST00000603860 190 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 uc_338.32-201ENST00000615087 172 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC007998.5-201ENST00000622938 237 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC005609.4-201ENST00000625071 447 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 SEPT14P19-203ENST00000633205 211 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 OR5H6-203ENST00000642105 978 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
LSM4Q9Y4Z0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LSM4Q9Y4Z0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.34□□□□□ -1.88
LSM4Q9Y4Z0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LSM4Q9Y4Z0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
LSM4Q9Y4Z0 AC027514.1-201ENST00000588561 1603 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RN7SKP280-201ENST00000364196 304 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RNU1-132P-201ENST00000364300 164 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 MIR181A1-201ENST00000385026 110 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AL022722.2-201ENST00000402519 180 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RNA5SP317-201ENST00000410176 116 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RNA5SP311-201ENST00000411290 116 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 DPPA2P1-201ENST00000428060 556 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 C8orf59P1-201ENST00000429930 303 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 HSFY6P-201ENST00000445573 403 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC133473.1-201ENST00000455173 299 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 HMGN2P7-201ENST00000456186 273 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC041039.1-201ENST00000485656 536 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC026427.2-201ENST00000506228 536 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC010460.1-201ENST00000507087 466 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 HMGB3P15-201ENST00000507326 574 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AC117522.1-201ENST00000509821 380 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 ARL2BPP6-201ENST00000512757 439 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 SNORA31.3-201ENST00000516029 96 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RNU6-927P-201ENST00000516199 100 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RNA5SP315-201ENST00000516340 116 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RNU6-352P-201ENST00000516908 107 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 RNA5SP312-201ENST00000517068 116 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 IGKV2-38-201ENST00000517443 247 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 MTND1P5-201ENST00000517906 940 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.33□□□□□ -1.88
LSM4Q9Y4Z0 AP001804.3-201ENST00000525146 880 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms