Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 RNU6-317P-201ENST00000384031 107 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 Y_RNA.433-201ENST00000384089 102 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AL121972.1-201ENST00000402023 252 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 MTND4P13-201ENST00000402078 1023 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 BTBD10P2-201ENST00000404779 676 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 RNA5SP38-201ENST00000410750 119 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 TPMTP4-201ENST00000450749 678 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC109486.1-201ENST00000486833 374 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 SNORD116-30-201ENST00000516468 85 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC010735.1-201ENST00000567305 1026 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC103810.1-201ENST00000579873 453 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AP003117.1-201ENST00000602771 554 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC016877.3-201ENST00000606778 504 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 AC121761.2-201ENST00000617300 689 ntBASIC2.6□□□□□ -1.99
RIMBP3Q9UFD9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 RNY1P4-201ENST00000384595 115 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 ELOCP11-201ENST00000436690 332 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 ELOCP16-201ENST00000444494 332 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 HMGB1P26-201ENST00000452520 628 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 RPL30P11-201ENST00000495304 339 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 FABP5P5-201ENST00000515537 406 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 HMGN1P28-201ENST00000521340 364 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 AC124283.4-201ENST00000581815 456 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 MTCO2P22-201ENST00000603246 681 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 LLPHP1-201ENST00000603571 367 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 AC055764.2-201ENST00000610089 670 ntBASIC2.59□□□□□ -1.99
RIMBP3Q9UFD9 ZNF33CP-201ENST00000432492 2030 ntBASIC2.59□□□□□ -2
RIMBP3Q9UFD9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
RIMBP3Q9UFD9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.58□□□□□ -2
RIMBP3Q9UFD9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.58□□□□□ -2
RIMBP3Q9UFD9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
RIMBP3Q9UFD9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RIMBP3Q9UFD9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RIMBP3Q9UFD9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RIMBP3Q9UFD9 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 RNA5SP295-201ENST00000362655 121 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 RNU6-37P-201ENST00000362692 107 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 RNU6-11P-201ENST00000364234 107 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 MCTS2P-201ENST00000394552 546 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 HMGN2P21-201ENST00000447764 270 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 RPL31P20-201ENST00000449593 360 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 Y_RNA.681-201ENST00000516445 113 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 MIR6078-201ENST00000611069 100 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 CALM1P1-201ENST00000442082 433 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 MTND4LP22-201ENST00000508209 276 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 RNU4-60P-201ENST00000517239 135 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.57□□□□□ -2
RIMBP3Q9UFD9 AP005212.4-201ENST00000614206 710 ntBASIC2.57□□□□□ -2
RIMBP3Q9UFD9 RNU1-139P-201ENST00000391307 165 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.56□□□□□ -2
RIMBP3Q9UFD9 RPL19P1-201ENST00000411635 428 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 XKRYP4-201ENST00000414395 483 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 MTND2P16-201ENST00000419987 799 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 FNDC3CP-201ENST00000420795 1155 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC234781.2-201ENST00000426370 994 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AL031663.1-201ENST00000437445 219 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 MTCYBP12-201ENST00000440559 1134 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AL157827.1-201ENST00000447622 132 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 XKRYP5-201ENST00000449659 483 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 MTND2P8-201ENST00000450555 1025 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 PTGES3P5-201ENST00000455109 434 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.56□□□□□ -2
RIMBP3Q9UFD9 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.56□□□□□ -2
RIMBP3Q9UFD9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.56□□□□□ -2
RIMBP3Q9UFD9 FAM60CP-201ENST00000591086 664 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC090425.2-201ENST00000608818 501 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC008121.3-201ENST00000618726 433 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 AC015726.3-201ENST00000624501 418 ntBASIC2.56□□□□□ -2
RIMBP3Q9UFD9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms