Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 ZNF807-201ENST00000328088 1707 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 RNU6-28P-201ENST00000362378 107 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 TPMTP3-201ENST00000411928 735 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 RPS7P13-201ENST00000413955 498 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 RPL23AP82-202ENST00000427528 469 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AL390023.1-201ENST00000428836 262 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 SDCBPP1-201ENST00000440192 890 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 UBE2D3P4-201ENST00000441973 436 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 CENPBD1P1-201ENST00000464061 469 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 RN7SL442P-201ENST00000473804 320 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC024589.1-201ENST00000512207 263 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AP002404.1-201ENST00000532005 451 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 MTCYBP22-201ENST00000603788 447 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC004853.1-201ENST00000604902 698 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 BCRP9-201ENST00000605312 388 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC055876.5-201ENST00000605667 259 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AL590240.3-201ENST00000621416 943 ntBASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NLGN3Q9NZ94 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AL445523.1-201ENST00000451184 1362 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AL672167.1-206ENST00000356293 943 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 Y_RNA.97-201ENST00000363094 102 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 Y_RNA.234-201ENST00000364409 97 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RNU6-744P-201ENST00000365557 107 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RNU6-1316P-201ENST00000384242 108 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 SNORA48.8-201ENST00000391324 134 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RN7SKP266-201ENST00000410232 287 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RNA5SP31-201ENST00000411144 127 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RNA5SP107-201ENST00000411358 122 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 MTCYBP39-201ENST00000437562 491 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 EPS15P1-201ENST00000448836 336 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 snoU109.4-201ENST00000458953 143 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 RPS27AP1-201ENST00000475545 471 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 COX7A2P2-201ENST00000505291 250 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC010625.1-201ENST00000511296 403 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC034159.1-201ENST00000513885 583 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 ROCK1P1-201ENST00000573767 549 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 MIR4474-201ENST00000579189 78 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AP005136.1-201ENST00000579765 429 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AP001004.1-201ENST00000582468 324 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AL353997.4-201ENST00000586196 166 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AP001029.3-201ENST00000588063 596 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC093732.2-201ENST00000607950 274 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC103710.4-201ENST00000609301 899 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 MIR7844-201ENST00000616161 122 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC048344.4-201ENST00000619744 527 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC018692.3-201ENST00000623929 123 ntBASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NLGN3Q9NZ94 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.15□□□□□ -1.9
NLGN3Q9NZ94 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
NLGN3Q9NZ94 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 RNU1-70P-201ENST00000362618 164 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 RNU6-1074P-201ENST00000383995 104 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 MIR1302-8-201ENST00000408342 128 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 MIR320C1-201ENST00000408566 88 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 RNU4-65P-201ENST00000410473 140 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 BX119904.4-201ENST00000424402 301 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms