Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC034105.4-201ENST00000568304 277 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 MIR3611-201ENST00000584484 83 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC112230.1-201ENST00000604342 547 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC068276.1-201ENST00000605793 379 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC091965.4-201ENST00000607691 587 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC025594.3-201ENST00000613068 790 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC011939.3-201ENST00000613686 466 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AL157817.1-201ENST00000614264 790 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 U73479.1-201ENST00000618062 168 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC009878.1-201ENST00000621819 340 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AL049780.3-201ENST00000624612 1583 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RN7SKP280-201ENST00000364196 304 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 SNORA62.3-201ENST00000365110 153 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RNU6-821P-201ENST00000390995 107 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AL356421.1-201ENST00000403255 413 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC245052.5-201ENST00000416320 649 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AL451062.2-201ENST00000427515 271 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RPL21P40-201ENST00000428586 483 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 VDAC1P3-201ENST00000434069 851 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC034236.1-201ENST00000469891 373 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC006390.1-201ENST00000508068 283 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC010625.1-201ENST00000511296 403 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 Y_RNA.655-201ENST00000515919 96 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RN7SKP18-201ENST00000516005 275 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RNU6-714P-201ENST00000516963 103 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 MTND4LP18-201ENST00000526864 291 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC024909.2-201ENST00000553035 286 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC034268.2-201ENST00000571784 482 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 MIR5697-201ENST00000578045 78 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC083760.1-201ENST00000589621 670 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC012119.1-201ENST00000603184 222 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC004853.1-201ENST00000604902 698 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC006023.2-201ENST00000609916 167 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC010678.1-201ENST00000614118 713 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AL590240.3-201ENST00000621416 943 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 AC004925.1-201ENST00000624256 2706 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 MTND4P4-201ENST00000439033 1366 ntBASIC3.1□□□□□ -1.91
NDE1Q9NXR1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDE1Q9NXR1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AL161781.1-201ENST00000354277 403 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 MIR372-201ENST00000362225 67 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 RNU1-70P-201ENST00000362618 164 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 MIR1305-201ENST00000408300 86 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 RPL17P12-201ENST00000413391 526 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 MRPL50P2-201ENST00000416821 482 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 HSPE1P1-201ENST00000421494 318 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.09□□□□□ -1.91
NDE1Q9NXR1 ST13P20-201ENST00000447996 1065 ntBASIC3.09□□□□□ -1.91
NDE1Q9NXR1 AL353691.1-201ENST00000451332 387 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms