Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 OR6K5P-201ENST00000447050 945 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC117440.1-201ENST00000474107 571 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 RNA5SP356-201ENST00000515972 94 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 RN7SKP272-201ENST00000516988 232 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 MTND2P32-201ENST00000521584 1038 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 MTCO3P24-201ENST00000572729 782 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 BBIP1P1-201ENST00000602999 279 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC097478.2-201ENST00000610572 514 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AL513185.3-201ENST00000433335 1300 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC009812.4-201ENST00000569134 1805 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC073325.2-201ENST00000339545 159 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 Y_RNA.548-201ENST00000384656 105 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 RNU2-43P-201ENST00000410306 190 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 RNA5SP492-201ENST00000411330 114 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 MTCYBP38-201ENST00000417160 1123 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 SDCBPP3-201ENST00000419629 891 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 OR2AS1P-201ENST00000427827 319 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 ZYG11AP1-201ENST00000430329 837 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC022018.1-201ENST00000430685 241 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 FGF7P5-201ENST00000441829 291 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AL121871.1-201ENST00000443413 436 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AL590664.1-201ENST00000448065 339 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 RPL7P18-201ENST00000478965 734 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 VN1R104P-201ENST00000505115 1009 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 COX6CP8-201ENST00000522620 226 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 OR6C7P-201ENST00000547875 934 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AP005205.1-201ENST00000563503 508 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AGGF1P5-201ENST00000567900 919 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC013444.2-201ENST00000603317 787 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AL450336.1-201ENST00000605180 586 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AL590099.1-201ENST00000615276 138 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.12□□□□□ -1.91
HPS4Q9NQG7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.12□□□□□ -1.91
HPS4Q9NQG7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 FRG1BP-201ENST00000278882 761 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 Y_RNA.234-201ENST00000364409 97 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC110754.1-201ENST00000399740 601 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 MTCO2P17-201ENST00000424336 677 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC024082.2-201ENST00000434771 238 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 MTND3P1-201ENST00000441336 220 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 snoU13.8-201ENST00000458890 104 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC104090.1-201ENST00000506341 1171 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC103783.1-201ENST00000520506 373 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 MTND4P33-201ENST00000556706 766 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 GTF3AP2-201ENST00000557014 266 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AL157394.1-201ENST00000562983 1224 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HPS4Q9NQG7 DDX43P2-201ENST00000604753 1354 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
HPS4Q9NQG7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms