Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 7SK.7-201ENST00000603504 247 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AL451044.1-201ENST00000604867 238 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RNA5SP108-201ENST00000605921 117 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC005014.2-201ENST00000607795 599 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 uc_338.34-201ENST00000617467 174 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC087588.2-201ENST00000617667 426 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RMST_9.1-201ENST00000619945 193 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC009902.3-201ENST00000606235 2172 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF38Q9H0F5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.71□□□□□ -1.65
RNF38Q9H0F5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MTND4P14-201ENST00000435799 1354 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 Y_RNA.187-201ENST00000363918 113 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MIR568-201ENST00000385036 95 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MT-TR-201ENST00000387439 65 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AL592114.1-201ENST00000403842 483 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AL121834.1-202ENST00000404494 277 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC074085.1-201ENST00000413598 418 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 RAC1P7-201ENST00000445367 377 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 RNU7-180P-201ENST00000459240 63 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 RPL7AP28-201ENST00000464513 571 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC126389.1-201ENST00000477436 290 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 RPL39P5-202ENST00000512505 151 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 SMURF2P1-201ENST00000514992 481 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 RN7SKP122-201ENST00000515923 296 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC011979.2-201ENST00000527568 352 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 SETP2-201ENST00000553886 926 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC015912.2-201ENST00000571053 181 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MIR4703-201ENST00000577728 79 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MIR4790-201ENST00000577799 79 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MIR3149-201ENST00000584629 83 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MIR3138-201ENST00000585238 82 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MIR4424-201ENST00000585257 86 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 IGHV3-29-201ENST00000604817 344 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC022893.3-201ENST00000607665 437 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC020634.1-201ENST00000608701 549 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AC007792.1-201ENST00000623023 402 ntBASIC4.71□□□□□ -1.66
RNF38Q9H0F5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF38Q9H0F5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 U3.11-201ENST00000364476 212 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 RNU6-1318P-201ENST00000365389 103 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 Y_RNA.401-201ENST00000383965 117 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 MED13P1-201ENST00000428342 171 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 RPS29P17-201ENST00000430795 166 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 RPL21P89-201ENST00000444021 467 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AL353691.1-201ENST00000451332 387 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 MTND1P9-201ENST00000453775 944 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 snoU109.4-201ENST00000458953 143 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 MIR2053-201ENST00000459295 91 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC053481.1-201ENST00000467217 306 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC010618.1-201ENST00000469924 477 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC103987.1-201ENST00000473394 348 ntBASIC4.7□□□□□ -1.66
RNF38Q9H0F5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF38Q9H0F5 AC008694.2-201ENST00000517591 306 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms