Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 GNG5P1-201ENST00000255500 204 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 Y_RNA.234-201ENST00000364409 97 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 RNU6-1035P-201ENST00000384477 107 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 MIR483-201ENST00000385070 76 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AL590084.1-201ENST00000407885 387 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 RPL19P1-201ENST00000411635 428 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 RAP1BP1-201ENST00000412709 553 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 BMS1P22-201ENST00000414726 313 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AL513477.1-202ENST00000417061 214 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC008850.1-201ENST00000427546 362 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AL022578.1-201ENST00000439330 1433 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 SDAD1P2-201ENST00000441308 2028 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 RPL18AP17-201ENST00000455326 198 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AL109741.2-201ENST00000455561 343 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC008837.2-201ENST00000513076 418 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 SCARNA15.2-201ENST00000516409 127 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC021451.1-201ENST00000523498 1129 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC005832.3-201ENST00000537929 631 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC090888.1-201ENST00000561335 1141 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AMZ2P1-203ENST00000565833 850 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC083760.1-201ENST00000589621 670 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AL020991.1-201ENST00000612314 373 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC002550.2-201ENST00000621246 394 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC084035.1-201ENST00000634543 607 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 MIR4275-201ENST00000636486 87 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 LINC02211-204ENST00000642024 1070 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.89□□□□□ -1.95
POLR1EQ9GZS1 AC008669.1-201ENST00000565823 2178 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 SNORD56.5-201ENST00000364281 72 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 MIR767-201ENST00000390228 109 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AL354692.1-201ENST00000423044 315 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 PPP1R11P2-201ENST00000423543 382 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 RPL23AP76-201ENST00000441860 458 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC097493.1-201ENST00000463958 372 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC117522.3-201ENST00000507974 584 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC098799.2-201ENST00000509466 868 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 TTC39CP1-201ENST00000512513 755 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 RNU6-840P-201ENST00000517275 65 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 MTCO1P47-201ENST00000523889 1271 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 HPRT1P3-201ENST00000539521 576 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AADACP1-206ENST00000561502 1193 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 RPL23AP84-201ENST00000571193 464 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC091057.3-201ENST00000602684 733 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC021749.1-201ENST00000604322 607 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AL035413.2-201ENST00000604801 525 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AL136363.1-201ENST00000605349 337 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AC005000.2-201ENST00000605468 310 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AL136370.1-201ENST00000608166 691 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AL357080.1-201ENST00000617394 239 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 AL445984.1-201ENST00000637834 659 ntBASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
POLR1EQ9GZS1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AC010680.1-201ENST00000590024 3590 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 RPL9P7-201ENST00000330965 580 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 BX322784.1-201ENST00000455793 1077 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 RNU7-136P-201ENST00000458819 69 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AC080014.1-201ENST00000496877 1201 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 RPL21P131-201ENST00000497298 483 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms