Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 Y_RNA.14-201ENST00000362415 103 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 SNORD62.1-201ENST00000362541 86 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 Y_RNA.222-201ENST00000364264 102 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 SNORA70F-201ENST00000384142 135 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 Y_RNA.483-201ENST00000384380 101 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 Y_RNA.515-201ENST00000384535 112 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 RPL23AP69-201ENST00000431134 458 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 MRPS18BP2-201ENST00000434310 759 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC093414.1-201ENST00000434712 514 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC099799.1-201ENST00000439809 192 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 NOTCH2P1-201ENST00000443481 624 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AL590664.1-201ENST00000448065 339 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 RNU7-167P-201ENST00000459160 62 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 IGHV3-76-201ENST00000522465 295 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 RANP3-201ENST00000530970 276 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 HSBP1P1-201ENST00000555205 166 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC006254.3-201ENST00000603353 884 ntBASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBE2OQ9C0C9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AL034549.2-201ENST00000618285 3373 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC010300.1-201ENST00000600671 5134 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AL590240.1-201ENST00000334118 313 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 SNORA41-201ENST00000384675 132 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 Y_RNA.562-201ENST00000384695 113 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 MIR92A2-201ENST00000385299 75 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 CALM2P2-201ENST00000428512 440 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 RPL21P91-201ENST00000429231 479 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC073910.1-201ENST00000445047 438 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC022133.1-201ENST00000490961 571 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 DEFB109F-201ENST00000491870 277 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 RPS24P16-201ENST00000497294 392 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 Y_RNA.715-201ENST00000517082 110 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC012339.2-201ENST00000523996 453 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC108738.1-201ENST00000603703 237 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 AL161423.1-201ENST00000613700 262 ntBASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBE2OQ9C0C9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 EXOC5P1-201ENST00000510543 1969 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 Y_RNA.2-201ENST00000362330 96 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 RNA5SP391-201ENST00000363456 119 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 RNU6-1059P-201ENST00000363752 98 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 RNU6-1243P-201ENST00000364028 107 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 RNU2-15P-201ENST00000410692 191 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 RPL21P109-201ENST00000422213 475 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 RPS17P13-201ENST00000448974 407 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 IGHV5-78-201ENST00000450948 295 ntBASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.49□□□□□ -1.53
UBE2OQ9C0C9 AC087884.1-201ENST00000469738 328 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms