Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Y_RNA.772-201ENST00000606692 102 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC097372.5-201ENST00000623665 376 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AL606537.1-201ENST00000607258 2011 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC068870.1-201ENST00000563737 2455 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AL137003.2-201ENST00000606924 2538 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC004158.1-201ENST00000564508 4319 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 Y_RNA.127-201ENST00000363386 109 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 RNU6-923P-201ENST00000364753 107 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 U3.13-201ENST00000364804 214 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 U8.8-201ENST00000365399 135 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 Y_RNA.504-201ENST00000384481 104 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 PTMAP2-201ENST00000397627 327 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 RN7SKP159-201ENST00000410657 292 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 MTCO1P5-201ENST00000433573 344 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AC016925.1-201ENST00000458303 298 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 HMGB1P21-201ENST00000502313 581 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AC113155.1-201ENST00000511141 769 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 RN7SKP288-201ENST00000516227 268 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AC091144.1-201ENST00000519573 138 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 IGHV1-14-201ENST00000523391 241 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AP001880.2-201ENST00000538233 448 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AC007566.2-201ENST00000603642 413 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 MIR3976-201ENST00000606807 139 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 AC241377.1-201ENST00000619797 406 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 Z95114.1-201ENST00000624264 14574 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.38□□□□□ -1.55
COL25A1Q9BXS0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AP000547.3-204ENST00000588548 2523 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AL078621.3-201ENST00000623707 2042 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 RNU4-90P-201ENST00000362773 141 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 Y_RNA.215-201ENST00000364204 112 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AL079342.1-201ENST00000401460 267 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 EZH2P1-201ENST00000431167 291 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC073063.1-201ENST00000434352 607 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 RPS26P56-201ENST00000444468 240 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC008264.1-201ENST00000447612 367 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 RNU4-57P-201ENST00000515980 135 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 RNU6-426P-201ENST00000516464 97 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC069113.1-201ENST00000517763 267 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AP006245.1-201ENST00000522549 120 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms