Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SSBP3Q9BWW4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP3Q9BWW4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AL672167.1-204ENST00000641875 3017 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AL731566.1-201ENST00000620490 1937 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC233263.6-201ENST00000631132 1963 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RNA5SP391-201ENST00000363456 119 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RNU6-214P-201ENST00000384130 107 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 SNORA41-201ENST00000384675 132 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 MIR585-201ENST00000384887 94 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RN7SKP159-201ENST00000410657 292 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RPL21P109-201ENST00000422213 475 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RPL7P37-201ENST00000425095 738 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC093106.2-201ENST00000428212 385 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RN7SL432P-201ENST00000484057 298 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RN7SL346P-201ENST00000491561 294 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 HMGB3P17-201ENST00000504195 649 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RNU6-1023P-201ENST00000516137 106 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 Y_RNA.680-201ENST00000516441 93 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 RRN3P3-201ENST00000549207 578 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 MIR4293-201ENST00000584305 78 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 IGHV3-29-201ENST00000604817 344 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AL138825.1-201ENST00000618587 192 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 AC103858.2-201ENST00000621471 543 ntBASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP3Q9BWW4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 SNORA73.1-201ENST00000363107 205 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 Y_RNA.106-201ENST00000363189 100 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 RNU6-1284P-201ENST00000363701 100 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 RNU6-306P-201ENST00000384617 107 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 RNU6-95P-201ENST00000384697 107 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 SNORA16.2-201ENST00000390991 127 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AC243428.1-201ENST00000421099 264 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL360081.1-201ENST00000428299 555 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 USP9YP30-201ENST00000430729 455 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AC093414.1-201ENST00000434712 514 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL353597.2-202ENST00000434901 373 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AC073910.1-201ENST00000445047 438 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL589765.3-201ENST00000446084 462 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 PPIAP3-201ENST00000450588 505 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL691482.1-201ENST00000453255 87 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AC090686.1-201ENST00000481577 749 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 HMGB1P21-201ENST00000502313 581 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AC096745.1-201ENST00000509945 370 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 OR5D17P-201ENST00000531492 978 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms