Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC007536.1-201ENST00000533382 349 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC006504.3-201ENST00000586818 523 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC023043.3-201ENST00000593113 385 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AP001429.1-201ENST00000602568 530 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 BBIP1P1-201ENST00000602999 279 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC004987.4-201ENST00000603383 338 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL031281.1-201ENST00000604049 488 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC005046.1-201ENST00000608515 625 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 MIR6130-201ENST00000619419 109 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC095031.1-201ENST00000623685 672 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC017037.3-201ENST00000625016 472 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC092593.1-201ENST00000515413 1815 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 RPL21P132-201ENST00000331267 462 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 RNU6-723P-201ENST00000383973 107 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 RNU6-1207P-201ENST00000384343 107 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 PPP1R11P2-201ENST00000423543 382 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AL022400.1-201ENST00000423946 935 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 MTND1P20-201ENST00000430341 950 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC024082.2-201ENST00000434771 238 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 LSM1P1-201ENST00000438629 273 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AL109741.2-201ENST00000455561 343 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 snoU13.8-201ENST00000458890 104 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 RN7SL601P-201ENST00000471221 293 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC104563.1-201ENST00000476147 376 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC103975.1-201ENST00000482506 483 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC021382.1-201ENST00000483523 359 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 MLLT10P2-201ENST00000506434 249 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 MTCYBP43-201ENST00000513621 740 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC034159.1-201ENST00000513885 583 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 RNU1-61P-201ENST00000516107 151 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 SNORA31.26-201ENST00000517250 137 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 MIR5004-201ENST00000579078 107 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 TUG1_1.1-201ENST00000610654 145 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC012314.7-201ENST00000619693 93 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC007490.1-201ENST00000624321 703 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 MTND5P33-201ENST00000571250 1450 ntBASIC2.39□□□□□ -2.03
HDHD3Q9BSH5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RNU5E-8P-201ENST00000363502 116 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RNU1-101P-201ENST00000391171 127 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RPL5P18-201ENST00000406671 891 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL591034.1-201ENST00000407447 340 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RNU4-65P-201ENST00000410473 140 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 MRPL50P2-201ENST00000416821 482 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 HSPE1P1-201ENST00000421494 318 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 SETP8-201ENST00000435341 628 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms