Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC130365.2-201ENST00000525882 1201 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 NDUFB4P11-201ENST00000560510 395 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 OR1E3-201ENST00000575608 948 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 U4.7-201ENST00000638126 106 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USB1Q9BQ65 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USB1Q9BQ65 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 AL353796.1-201ENST00000561542 3241 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 AC020656.2-201ENST00000613291 5309 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC100821.1-201ENST00000523153 2479 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AL079305.1-201ENST00000623159 3008 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 RNA5SP433-201ENST00000364491 114 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 RNA5SP205-201ENST00000364653 136 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 RNU6-44P-201ENST00000384045 107 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 RNU6-968P-201ENST00000384076 107 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 SNORA70E-201ENST00000384492 135 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 MIR32-201ENST00000384965 70 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 MIR186-201ENST00000384988 86 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC005522.1-201ENST00000395416 346 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AL035461.1-201ENST00000421490 332 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AL354707.3-201ENST00000427308 331 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC007679.3-201ENST00000434035 414 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 BTF3P6-201ENST00000448054 499 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 AL353705.4-201ENST00000449661 238 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 FABP5P15-201ENST00000453566 214 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 RPL12P30-201ENST00000488389 499 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 RNU6-1114P-201ENST00000516022 107 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC021006.3-201ENST00000530771 192 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC009120.3-201ENST00000563335 499 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 SRRM1P3-201ENST00000426911 2678 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC009541.1-201ENST00000438279 2662 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 AC116096.1-201ENST00000566804 2314 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
USB1Q9BQ65 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USB1Q9BQ65 RAD17P1-201ENST00000418130 2042 ntBASIC5.52□□□□□ -1.53
USB1Q9BQ65 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USB1Q9BQ65 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USB1Q9BQ65 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USB1Q9BQ65 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USB1Q9BQ65 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 SNORD115-32-201ENST00000364079 82 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 Y_RNA.273-201ENST00000364703 102 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 RNU1-59P-201ENST00000364829 162 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AL357139.1-201ENST00000407792 426 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AL035422.1-201ENST00000414193 397 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AL354868.1-201ENST00000417077 482 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AP000281.1-201ENST00000444036 316 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AC005077.1-201ENST00000449226 375 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 VPS25P1-201ENST00000455691 508 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 RPS5P7-201ENST00000456664 608 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 LSM3P4-201ENST00000502948 309 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 TOMM22P4-201ENST00000511318 336 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AC004980.4-201ENST00000513375 203 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 RNU6-426P-201ENST00000516464 97 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 MIR5692C2-201ENST00000577959 77 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AC233702.7-202ENST00000582941 211 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms