Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC005832.2-201ENST00000538921 1430 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 Y_RNA.1-201ENST00000352915 104 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 RNU1-15P-201ENST00000353977 144 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 RNA5SP235-201ENST00000365411 114 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 RNU6-754P-201ENST00000391166 107 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 MTCO3P40-201ENST00000392516 676 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 MIR548F1-201ENST00000408667 84 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 RNU2-43P-201ENST00000410306 190 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 RPS23P10-201ENST00000416185 486 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 TIMM9P3-201ENST00000428659 274 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 MTCO2P11-201ENST00000431069 680 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AL049714.1-201ENST00000466686 347 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC022616.3-201ENST00000523940 148 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 FAM92A1P1-201ENST00000528023 890 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC007424.1-203ENST00000554613 687 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 MIR3167-201ENST00000579623 85 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 MIR4513-201ENST00000581077 86 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 MIR3124-201ENST00000582636 67 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 SNRPGP15-201ENST00000600149 222 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC093838.1-201ENST00000613014 469 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC140113.4-201ENST00000622087 222 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AC091905.1-201ENST00000624400 311 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 AL157786.1-207ENST00000627771 695 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ZNF962P-201ENST00000443465 3140 ntBASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM43Q96BQ3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 DDX10P1-201ENST00000448545 1933 ntBASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM43Q96BQ3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC004925.1-201ENST00000624256 2706 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 OR5J1P-201ENST00000313544 939 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 MIR448-201ENST00000362131 111 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 RNU6-1103P-201ENST00000384150 107 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AL109755.1-201ENST00000401791 649 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 MIR1251-201ENST00000408552 70 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 CYCSP4-201ENST00000429682 331 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC236972.1-201ENST00000433225 199 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 UBE2V1P8-201ENST00000437166 265 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC132479.1-201ENST00000449160 144 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 SNORD105B-201ENST00000458770 79 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 RN7SL807P-201ENST00000470923 297 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 RPS3AP14-201ENST00000483907 780 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC026784.1-201ENST00000507986 352 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 FTH1P9-201ENST00000513251 355 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC114797.1-201ENST00000514003 728 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 NCAPGP2-201ENST00000557911 754 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC068944.2-201ENST00000610373 403 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AC090517.2-201ENST00000614966 680 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms