Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.32□□□□□ -1.72
HPS3Q969F9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.32□□□□□ -1.72
HPS3Q969F9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS3Q969F9 PPP1R11P2-201ENST00000423543 382 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 MTCYBP5-201ENST00000423752 1135 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS3Q969F9 AL662791.1-201ENST00000441992 928 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.32□□□□□ -1.72
HPS3Q969F9 MTCO3P45-201ENST00000443036 613 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS3Q969F9 AC022364.2-201ENST00000457963 554 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC008481.1-201ENST00000463278 396 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC023598.1-201ENST00000472521 361 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 RPS3AP14-201ENST00000483907 780 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC110792.1-201ENST00000491826 472 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS3Q969F9 HMGB1P22-201ENST00000505315 124 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS3Q969F9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS3Q969F9 RNU7-51P-201ENST00000516560 62 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC100870.1-201ENST00000522035 505 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 FAM60DP-201ENST00000524174 632 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.32□□□□□ -1.72
HPS3Q969F9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 AC123904.3-201ENST00000547218 814 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS3Q969F9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS3Q969F9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.32□□□□□ -1.72
HPS3Q969F9 AF038458.1-201ENST00000588406 262 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AL136363.1-201ENST00000605349 337 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC103710.2-201ENST00000609912 942 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC079684.1-201ENST00000621405 437 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 AC112200.1-201ENST00000625015 234 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS3Q969F9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS3Q969F9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HPS3Q969F9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HPS3Q969F9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 AC092326.2-201ENST00000624772 1561 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HPS3Q969F9 HSPE1P11-201ENST00000339579 310 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 RNU6-1284P-201ENST00000363701 100 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 SNORA23-201ENST00000365128 182 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS3Q969F9 MIR134-201ENST00000385258 73 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 TXNP7-201ENST00000406296 293 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AL590002.1-201ENST00000406554 418 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS3Q969F9 TOMM22P1-201ENST00000418578 312 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS3Q969F9 DUTP6-201ENST00000425573 462 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 ATP5HP2-201ENST00000433885 485 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 AC024082.2-201ENST00000434771 238 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 UBE2V1P8-201ENST00000437166 265 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 SNORD97-201ENST00000459187 142 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 RPS27AP1-201ENST00000475545 471 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC069499.1-201ENST00000489433 509 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 RNA5SP208-201ENST00000516156 78 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 RNU6-410P-201ENST00000517006 107 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 OR8R1P-201ENST00000543943 764 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS3Q969F9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS3Q969F9 AC120057.2-201ENST00000571520 271 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC105224.1-201ENST00000587055 421 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC098848.2-201ENST00000588023 330 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS3Q969F9 AC012443.1-201ENST00000605605 231 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS3Q969F9 AC090517.2-201ENST00000614966 680 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 SNHG22-203ENST00000617833 660 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AL360181.4-201ENST00000621752 134 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AC009161.2-201ENST00000624626 138 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 AL157786.1-207ENST00000627771 695 ntBASIC4.31□□□□□ -1.72
HPS3Q969F9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HPS3Q969F9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HPS3Q969F9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HPS3Q969F9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HPS3Q969F9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HPS3Q969F9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.3□□□□□ -1.72
HPS3Q969F9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HPS3Q969F9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HPS3Q969F9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.3□□□□□ -1.72
HPS3Q969F9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
HPS3Q969F9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HPS3Q969F9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HPS3Q969F9 RNA5SP189-201ENST00000364920 115 ntBASIC4.3□□□□□ -1.72
HPS3Q969F9 RNU6-76P-201ENST00000384060 104 ntBASIC4.3□□□□□ -1.72
HPS3Q969F9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HPS3Q969F9 MIR548F1-201ENST00000408667 84 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms