Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC099669.2-201ENST00000616549 437 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AL359314.1-201ENST00000616913 261 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC244100.1-202ENST00000621554 382 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 BMS1P21-201ENST00000634565 365 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC073544.1-201ENST00000600110 1595 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 HSPE1P11-201ENST00000339579 310 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 RNU6-432P-201ENST00000384196 109 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 HLFP1-201ENST00000402375 499 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 RNA5SP118-201ENST00000410385 109 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 RNU4-78P-201ENST00000410940 126 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 RNU2-41P-201ENST00000410991 178 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 RAB28P1-201ENST00000411517 641 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 RPS20P5-201ENST00000434808 360 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 MTND4P25-201ENST00000441039 533 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 USP9YP8-201ENST00000441913 500 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 DDX3P2-201ENST00000446138 111 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 RNU7-63P-201ENST00000459054 62 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC068305.1-201ENST00000497406 726 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC008628.2-201ENST00000502605 298 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC046134.1-201ENST00000514454 666 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 HIF1AP1-201ENST00000553642 175 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC055876.1-202ENST00000567053 138 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 MIR3939-201ENST00000582614 106 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 LLPHP1-201ENST00000603571 367 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC009994.1-201ENST00000606889 253 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 Y_RNA.804-201ENST00000615262 101 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC104260.1-201ENST00000616660 539 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 MIR6810-201ENST00000622701 70 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC024940.5-201ENST00000622889 474 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC099654.5-201ENST00000636479 350 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 AC138649.5-201ENST00000637456 137 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4□□□□□ -1.77
ATG4AQ8WYN0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 MTND4P12-201ENST00000498999 1377 ntBASIC4□□□□□ -1.77
ATG4AQ8WYN0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4AQ8WYN0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 Y_RNA.22-201ENST00000362492 102 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 Y_RNA.367-201ENST00000365544 101 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 RNU6-637P-201ENST00000384050 107 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 RNU6-606P-201ENST00000384721 111 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 MIR558-201ENST00000384920 94 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 HSPE1P8-201ENST00000406997 288 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 OR9R1P-201ENST00000412200 877 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 C4BPAP2-201ENST00000428434 478 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC098614.3-201ENST00000438957 440 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC016696.1-201ENST00000446949 318 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 SNRPGP6-201ENST00000451124 220 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AL356010.1-201ENST00000456364 102 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AP000852.1-201ENST00000472460 573 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC084198.1-201ENST00000477747 402 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 PPIAP15-201ENST00000479662 484 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC135721.1-201ENST00000497954 479 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 RAC1P2-201ENST00000511164 579 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 AC114797.1-201ENST00000514003 728 ntBASIC3.99□□□□□ -1.77
ATG4AQ8WYN0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms