Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC139713.2-214ENST00000642059 1811 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 MTND4P1-201ENST00000457501 1466 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.197-201ENST00000364004 102 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 Y_RNA.301-201ENST00000364990 103 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 RNU6-715P-201ENST00000365204 103 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 RNU6-14P-201ENST00000384630 106 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 MTCYBP4-201ENST00000401524 249 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AL590704.1-201ENST00000402856 794 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AL357515.1-201ENST00000402967 542 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AL160275.3-201ENST00000423876 471 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 USP9YP16-201ENST00000430287 407 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 HMGN2P21-201ENST00000447764 270 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC000111.2-201ENST00000448200 210 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 USP9YP23-201ENST00000455085 407 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC087588.1-201ENST00000462203 316 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 HMGB1P22-201ENST00000505315 124 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 PTP4A1P4-201ENST00000512479 322 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC135001.1-201ENST00000544546 283 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC063950.1-201ENST00000552036 308 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC022726.1-201ENST00000587475 207 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 AC005255.1-201ENST00000593748 216 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 SNORD91B-202ENST00000608459 222 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 uc_338.22-201ENST00000622722 187 ntBASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NPAS4Q8IUM7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 SALL4P2-201ENST00000423288 2910 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 RNA5SP52-201ENST00000362448 134 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 RNA5SP167-201ENST00000365461 116 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AL139039.1-201ENST00000401900 692 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 RNU7-152P-201ENST00000458982 64 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 RPS17P2-201ENST00000461663 408 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 DYNLL1P5-201ENST00000467158 270 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 RPL31P60-201ENST00000478450 367 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AC093303.1-201ENST00000514549 295 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 SNRPGP18-201ENST00000553000 214 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AL110118.1-201ENST00000553543 400 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AC245389.1-201ENST00000605141 529 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 AC244517.12-201ENST00000623581 663 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPAS4Q8IUM7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 SMG1P4-204ENST00000523028 4131 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 OR4G2P-202ENST00000641004 1759 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 RNA5SP453-201ENST00000362503 119 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 MIR129-1-201ENST00000384972 72 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 U3.32-201ENST00000408116 212 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 AC074085.1-201ENST00000413598 418 ntBASIC5.25□□□□□ -1.57
NPAS4Q8IUM7 RPLP0P7-201ENST00000416050 667 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms