Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 AC093591.2-201ENST00000565254 3843 ntBASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 AC109446.1-201ENST00000566172 220 ntBASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 AL109918.3-201ENST00000603072 338 ntBASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 AC004805.2-201ENST00000605382 482 ntBASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 U6.104-201ENST00000637979 90 ntBASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 AC100778.3-201ENST00000580060 1750 ntBASIC4.76□□□□□ -1.65
UBE3DQ7Z6J8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RNU6-26P-201ENST00000383985 107 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 Y_RNA.447-201ENST00000384184 113 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RNU2-3P-201ENST00000410144 191 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RNU2-43P-201ENST00000410306 190 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RNU2-64P-201ENST00000411315 191 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC092809.3-201ENST00000415453 231 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC104333.2-201ENST00000422630 192 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC073063.1-201ENST00000434352 607 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RPL35AP21-201ENST00000437667 333 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 BTF3P6-201ENST00000448054 499 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 PCNPP5-201ENST00000452246 481 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AL356981.1-201ENST00000454879 684 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AL353752.1-201ENST00000454946 260 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 CEACAMP4-201ENST00000457676 421 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC018638.3-201ENST00000461273 132 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RN7SL244P-201ENST00000493405 297 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC073073.1-201ENST00000493920 463 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RPS27AP13-201ENST00000498403 237 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 MRPS33P2-201ENST00000507850 322 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 SCARNA21.2-201ENST00000516600 166 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 RN7SKP234-201ENST00000517173 224 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 CDH12P4-201ENST00000517835 295 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 CDH12P3-201ENST00000517935 295 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 CDH12P1-201ENST00000518435 295 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC087369.1-201ENST00000520775 996 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC093227.2-201ENST00000589357 285 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 OR7E18P-201ENST00000592589 702 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC002044.1-201ENST00000606707 158 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AL591516.1-201ENST00000611326 274 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AL450472.3-201ENST00000615578 367 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 MIR4272-201ENST00000635924 64 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 THAP12P5-201ENST00000405864 2275 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 MTND5P27-201ENST00000428871 1720 ntBASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3DQ7Z6J8 AC026951.1-201ENST00000559530 2459 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 SOCS5P3-201ENST00000425115 1576 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 AC008669.1-201ENST00000565823 2178 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 AC139769.1-204ENST00000472297 1931 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 RN7SKP115-201ENST00000363177 317 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 RNU6-371P-201ENST00000364283 108 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 AL138885.1-201ENST00000405921 675 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 SYF2P2-201ENST00000417620 583 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 HMGB1P27-201ENST00000431429 603 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 AL133396.1-201ENST00000432048 687 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 HSFY6P-201ENST00000445573 403 ntBASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.74□□□□□ -1.65
UBE3DQ7Z6J8 PCMTD1P1-201ENST00000455560 355 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms