Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SNORA51.6-201ENST00000384151 125 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 Y_RNA.476-201ENST00000384347 108 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 RNA5SP187-201ENST00000384400 119 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 DDX18P3-201ENST00000404856 2007 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 RPL7P2-201ENST00000427639 268 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 BTF3P6-201ENST00000448054 499 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AL162151.2-201ENST00000448875 158 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC005297.2-201ENST00000450430 606 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 NANOGP10-201ENST00000453325 895 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 RPL30P15-201ENST00000457129 321 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 U8.20-201ENST00000459445 131 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 PABPC1P3-201ENST00000469174 459 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-764P-201ENST00000516396 105 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-1038P-201ENST00000516516 104 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 RNU1-45P-201ENST00000517191 141 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AP003497.1-201ENST00000528472 562 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC015912.2-201ENST00000571053 181 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 MIR4444-1-201ENST00000581696 74 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 MIR4444-2-201ENST00000584390 74 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 UBE2L4-201ENST00000587688 464 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC022893.3-201ENST00000607665 437 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AC083806.3-201ENST00000614016 455 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 HMGB1P24-202ENST00000615653 685 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNKSR3Q6P9H4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-1032P-201ENST00000384100 107 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-1226P-201ENST00000384317 107 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-1026P-201ENST00000384465 108 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 MIR670-201ENST00000390142 98 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 MIR454-201ENST00000390180 115 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 MRPL42P3-201ENST00000401492 326 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 MCFD2P1-201ENST00000417812 300 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC137499.1-201ENST00000427602 88 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC006946.1-201ENST00000429106 328 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 TXNP1-201ENST00000441872 371 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AL035666.1-201ENST00000446195 348 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 RPL21P23-201ENST00000446654 460 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 TRBV26-201ENST00000456572 344 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 RPS29P15-201ENST00000458329 171 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 Y_RNA.653-201ENST00000459091 95 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 MIR2053-201ENST00000459295 91 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AL049714.1-201ENST00000466686 347 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 RN7SKP24-201ENST00000515888 284 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC009902.1-201ENST00000519351 183 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC053481.3-201ENST00000577881 843 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AF038458.1-201ENST00000588406 262 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 BNIP3P25-201ENST00000596023 559 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AL365434.2-201ENST00000607979 234 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 FAM27D1-201ENST00000612308 341 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AL596275.2-204ENST00000641628 552 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AL596275.2-206ENST00000641957 626 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 AL049555.1-201ENST00000562834 1933 ntBASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR3Q6P9H4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 ADAM5-202ENST00000399789 1942 ntBASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.74□□□□□ -1.65
CNKSR3Q6P9H4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms