Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 SNORD21-201ENST00000383953 95 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 RNU6-821P-201ENST00000390995 107 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 MTCO3P12-201ENST00000416718 547 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 USP9YP20-201ENST00000419224 558 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC079780.1-201ENST00000428259 207 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC012497.1-201ENST00000429392 575 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 RPL7P36-201ENST00000444633 681 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL358794.1-201ENST00000445689 381 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 VN1R10P-201ENST00000447106 875 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 EEF1B2P7-201ENST00000451177 676 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 RFC5P1-201ENST00000454419 874 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC100870.1-201ENST00000522035 505 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AP001189.2-201ENST00000527320 189 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 NBEAP1-201ENST00000554452 979 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL160237.3-201ENST00000604114 1013 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC069545.1-201ENST00000605671 358 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL138478.1-201ENST00000612252 832 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC024257.5-201ENST00000612739 531 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 SNHG22-203ENST00000617833 660 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC120349.2-201ENST00000625002 298 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AL445984.1-201ENST00000637834 659 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMARCB1Q12824 AC099654.7-201ENST00000635788 2127 ntBASIC2.71□□□□□ -1.98
SMARCB1Q12824 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.71□□□□□ -1.98
SMARCB1Q12824 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCB1Q12824 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCB1Q12824 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCB1Q12824 SNORD116-12-201ENST00000384468 92 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 RNU4-22P-201ENST00000411058 166 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 Z75741.2-201ENST00000417272 1167 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
SMARCB1Q12824 MUPP-201ENST00000438111 566 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 RPL23AP76-201ENST00000441860 458 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 TRGVB-201ENST00000453257 471 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC027673.1-201ENST00000456245 405 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 RPS20P24-201ENST00000457473 361 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 HSPE1P6-201ENST00000479457 291 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC079203.1-201ENST00000487972 404 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC119751.4-201ENST00000507498 357 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.7□□□□□ -1.98
SMARCB1Q12824 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC008837.2-201ENST00000513076 418 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 RN7SKP24-201ENST00000515888 284 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 RNU6-1225P-201ENST00000516336 65 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 RPL7P20-201ENST00000520308 745 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 LRRC6P1-201ENST00000532188 885 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCB1Q12824 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC004486.1-201ENST00000546846 233 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC128657.1-201ENST00000549459 145 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC126177.3-201ENST00000551839 688 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.7□□□□□ -1.98
SMARCB1Q12824 MIR5092-201ENST00000583139 88 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AL133507.1-201ENST00000605269 557 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC140725.3-201ENST00000616193 880 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC002076.2-201ENST00000617362 122 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC025034.2-201ENST00000623264 286 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 AC091925.2-201ENST00000625059 256 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.7□□□□□ -1.98
SMARCB1Q12824 LINC02211-204ENST00000642024 1070 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 Z82195.2-201ENST00000612348 18351 ntBASIC2.7□□□□□ -1.98
SMARCB1Q12824 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCB1Q12824 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
SMARCB1Q12824 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 RNU1-138P-201ENST00000384093 164 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AL590004.2-201ENST00000404787 371 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 RNU6-712P-201ENST00000410558 100 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 VN1R51P-201ENST00000411675 945 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 RPL21P32-201ENST00000419877 477 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC069528.1-202ENST00000482888 637 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC026412.2-201ENST00000512270 1075 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 RPPH1-2P-201ENST00000516688 293 ntBASIC2.69□□□□□ -1.98
SMARCB1Q12824 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms