Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ATXN1P54253 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.38□□□□□ -1.71
ATXN1P54253 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.38□□□□□ -1.71
ATXN1P54253 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.38□□□□□ -1.71
ATXN1P54253 RPL21P5-201ENST00000554662 472 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 HSPE1P5-201ENST00000561489 272 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.38□□□□□ -1.71
ATXN1P54253 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.38□□□□□ -1.71
ATXN1P54253 7SK.7-201ENST00000603504 247 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AL161729.4-201ENST00000604650 476 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.38□□□□□ -1.71
ATXN1P54253 AC009248.2-201ENST00000619826 254 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC006971.1-201ENST00000407916 4486 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATXN1P54253 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATXN1P54253 AL079305.1-201ENST00000623159 3008 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
ATXN1P54253 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.37□□□□□ -1.71
ATXN1P54253 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 AL161912.2-201ENST00000565707 3007 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 Y_RNA.67-201ENST00000362870 100 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 RNY4P14-201ENST00000363656 96 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 Y_RNA.193-201ENST00000363979 102 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 SNORA73.2-201ENST00000364946 201 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 RNU6-196P-201ENST00000384315 107 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 RPS3AP36-201ENST00000398190 775 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 CALM2P3-201ENST00000400429 449 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 FCF1P10-201ENST00000407590 479 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AC113618.1-201ENST00000416747 285 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 OR1AA1P-201ENST00000419597 916 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.37□□□□□ -1.71
ATXN1P54253 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 COX6B1P7-201ENST00000430845 235 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.37□□□□□ -1.71
ATXN1P54253 AC127537.2-201ENST00000439258 465 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 RABEPKP1-201ENST00000440529 1026 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 MTND6P13-201ENST00000443510 523 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.37□□□□□ -1.71
ATXN1P54253 PLGLA-201ENST00000465668 449 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 RPS29P25-201ENST00000481709 171 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AC093278.1-201ENST00000494700 600 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.37□□□□□ -1.71
ATXN1P54253 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ATXN1P54253 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AC091133.4-201ENST00000511142 308 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 MTCO2P4-201ENST00000517968 247 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.37□□□□□ -1.71
ATXN1P54253 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.37□□□□□ -1.71
ATXN1P54253 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.37□□□□□ -1.71
ATXN1P54253 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.37□□□□□ -1.71
ATXN1P54253 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.37□□□□□ -1.71
ATXN1P54253 AC006270.2-201ENST00000578523 652 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AC100830.2-201ENST00000581636 240 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 AL359999.1-201ENST00000604513 294 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.37□□□□□ -1.71
ATXN1P54253 AL031666.3-201ENST00000609320 1006 ntBASIC4.37□□□□□ -1.71
ATXN1P54253 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
ATXN1P54253 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.37□□□□□ -1.71
ATXN1P54253 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
ATXN1P54253 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.37□□□□□ -1.71
ATXN1P54253 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATXN1P54253 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ATXN1P54253 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATXN1P54253 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.36□□□□□ -1.71
ATXN1P54253 RLIMP1-201ENST00000339626 1680 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATXN1P54253 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
ATXN1P54253 Y_RNA.9-201ENST00000362354 101 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNU6-1309P-201ENST00000363305 108 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNA5SP130-201ENST00000364431 114 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNU6-343P-201ENST00000364709 104 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNU6-744P-201ENST00000365557 107 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNU6-730P-201ENST00000383954 104 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNU6-1316P-201ENST00000384242 108 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNU6-474P-201ENST00000384243 107 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 AL590704.1-201ENST00000402856 794 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 MIR548I3-201ENST00000408378 149 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 MIR548I1-201ENST00000408810 149 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RNA5SP146-201ENST00000410743 123 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 Z92545.1-201ENST00000411782 234 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 EI24P1-201ENST00000416584 867 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 SPA17P1-201ENST00000416656 452 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.36□□□□□ -1.71
ATXN1P54253 PDCL2P1-201ENST00000419302 352 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 MTCO2P5-201ENST00000422621 426 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 RBMY1KP-201ENST00000423480 476 ntBASIC4.36□□□□□ -1.71
ATXN1P54253 AL358176.2-201ENST00000425769 204 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms