Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CENPFP49454 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CENPFP49454 HMGN1P14-201ENST00000412459 517 ntBASIC1.47□□□□□ -2.17
CENPFP49454 ARL5AP3-201ENST00000439327 386 ntBASIC1.47□□□□□ -2.17
CENPFP49454 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
CENPFP49454 AC010329.2-201ENST00000595195 2737 ntBASIC1.47□□□□□ -2.17
CENPFP49454 RPL26P37-201ENST00000411983 438 ntBASIC1.46□□□□□ -2.18
CENPFP49454 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.46□□□□□ -2.18
CENPFP49454 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.46□□□□□ -2.18
CENPFP49454 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.46□□□□□ -2.18
CENPFP49454 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.46□□□□□ -2.18
CENPFP49454 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.46□□□□□ -2.18
CENPFP49454 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.46□□□□□ -2.18
CENPFP49454 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.46□□□□□ -2.18
CENPFP49454 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CENPFP49454 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.46□□□□□ -2.18
CENPFP49454 AC108059.3-201ENST00000456388 214 ntBASIC1.46□□□□□ -2.18
CENPFP49454 RNA5SP384-201ENST00000516615 116 ntBASIC1.46□□□□□ -2.18
CENPFP49454 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.46□□□□□ -2.18
CENPFP49454 AP001029.3-201ENST00000588063 596 ntBASIC1.46□□□□□ -2.18
CENPFP49454 RNU2-25P-201ENST00000411041 191 ntBASIC1.45□□□□□ -2.18
CENPFP49454 HMGN2P35-201ENST00000412164 270 ntBASIC1.45□□□□□ -2.18
CENPFP49454 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.45□□□□□ -2.18
CENPFP49454 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CENPFP49454 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.45□□□□□ -2.18
CENPFP49454 AC091488.1-201ENST00000604239 660 ntBASIC1.45□□□□□ -2.18
CENPFP49454 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CENPFP49454 SNORA50A-202ENST00000629536 136 ntBASIC1.45□□□□□ -2.18
CENPFP49454 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
CENPFP49454 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.45□□□□□ -2.18
CENPFP49454 KATNBL1P4-201ENST00000503545 918 ntBASIC1.45□□□□□ -2.18
CENPFP49454 NPM1P52-201ENST00000518264 846 ntBASIC1.45□□□□□ -2.18
CENPFP49454 MIR3935-201ENST00000583472 104 ntBASIC1.45□□□□□ -2.18
CENPFP49454 AC090525.3-201ENST00000605601 189 ntBASIC1.45□□□□□ -2.18
CENPFP49454 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CENPFP49454 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
CENPFP49454 AL691517.1-201ENST00000440833 1235 ntBASIC1.44□□□□□ -2.18
CENPFP49454 NEFMP1-201ENST00000443423 1006 ntBASIC1.44□□□□□ -2.18
CENPFP49454 RNU6-113P-201ENST00000516653 101 ntBASIC1.44□□□□□ -2.18
CENPFP49454 AC025755.1-201ENST00000521306 278 ntBASIC1.44□□□□□ -2.18
CENPFP49454 DUXAP5-201ENST00000529668 529 ntBASIC1.44□□□□□ -2.18
CENPFP49454 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.44□□□□□ -2.18
CENPFP49454 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CENPFP49454 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.44□□□□□ -2.18
CENPFP49454 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.44□□□□□ -2.18
CENPFP49454 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.44□□□□□ -2.18
CENPFP49454 AC011477.1-204ENST00000623416 1325 ntBASIC1.44□□□□□ -2.18
CENPFP49454 TEX21P-201ENST00000447107 1476 ntBASIC1.44□□□□□ -2.18
CENPFP49454 RNU1-133P-201ENST00000364867 167 ntBASIC1.44□□□□□ -2.18
CENPFP49454 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CENPFP49454 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.44□□□□□ -2.18
CENPFP49454 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CENPFP49454 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.44□□□□□ -2.18
CENPFP49454 AL138955.1-201ENST00000622881 1040 ntBASIC1.44□□□□□ -2.18
CENPFP49454 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.43□□□□□ -2.18
CENPFP49454 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.43□□□□□ -2.18
CENPFP49454 CYCSP33-201ENST00000414485 327 ntBASIC1.43□□□□□ -2.18
CENPFP49454 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.43□□□□□ -2.18
CENPFP49454 AP000873.1-201ENST00000463987 400 ntBASIC1.43□□□□□ -2.18
CENPFP49454 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.43□□□□□ -2.18
CENPFP49454 AC139103.1-201ENST00000534696 1030 ntBASIC1.43□□□□□ -2.18
CENPFP49454 HSPE1P3-201ENST00000559254 309 ntBASIC1.43□□□□□ -2.18
CENPFP49454 AC068338.1-201ENST00000565567 176 ntBASIC1.43□□□□□ -2.18
CENPFP49454 AC116447.1-201ENST00000613153 453 ntBASIC1.43□□□□□ -2.18
CENPFP49454 AC011890.2-201ENST00000613393 294 ntBASIC1.43□□□□□ -2.18
CENPFP49454 RNU6-716P-201ENST00000365621 103 ntBASIC1.43□□□□□ -2.18
CENPFP49454 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.43□□□□□ -2.18
CENPFP49454 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
CENPFP49454 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.43□□□□□ -2.18
CENPFP49454 AC010487.4-201ENST00000637027 61 ntBASIC1.43□□□□□ -2.18
CENPFP49454 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.43□□□□□ -2.18
CENPFP49454 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CENPFP49454 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
CENPFP49454 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.42□□□□□ -2.18
CENPFP49454 AL109741.2-201ENST00000455561 343 ntBASIC1.42□□□□□ -2.18
CENPFP49454 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.42□□□□□ -2.18
CENPFP49454 AL109653.1-201ENST00000603091 248 ntBASIC1.42□□□□□ -2.18
CENPFP49454 AC013553.2-201ENST00000604244 589 ntBASIC1.42□□□□□ -2.18
CENPFP49454 AC097468.3-201ENST00000607956 456 ntBASIC1.42□□□□□ -2.18
CENPFP49454 AC000367.1-201ENST00000452711 1766 ntBASIC1.42□□□□□ -2.18
CENPFP49454 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.42□□□□□ -2.18
CENPFP49454 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
CENPFP49454 AC036111.3-201ENST00000526389 112 ntBASIC1.42□□□□□ -2.18
CENPFP49454 AC007229.1-201ENST00000590455 412 ntBASIC1.42□□□□□ -2.18
CENPFP49454 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CENPFP49454 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.42□□□□□ -2.18
CENPFP49454 RNU6-115P-201ENST00000364310 107 ntBASIC1.42□□□□□ -2.18
CENPFP49454 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.42□□□□□ -2.18
CENPFP49454 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.42□□□□□ -2.18
CENPFP49454 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.42□□□□□ -2.18
CENPFP49454 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.42□□□□□ -2.18
CENPFP49454 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CENPFP49454 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CENPFP49454 RNU6-198P-201ENST00000384258 104 ntBASIC1.41□□□□□ -2.18
CENPFP49454 AC007256.1-201ENST00000392253 2765 ntBASIC1.41□□□□□ -2.18
CENPFP49454 AL096701.2-201ENST00000416920 238 ntBASIC1.41□□□□□ -2.18
CENPFP49454 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.41□□□□□ -2.18
CENPFP49454 AP005435.4-201ENST00000529514 284 ntBASIC1.41□□□□□ -2.18
CENPFP49454 AC111188.2-201ENST00000529697 1387 ntBASIC1.41□□□□□ -2.18
CENPFP49454 SEPT7P9-203ENST00000604116 343 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms