Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CENPAP49450 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CENPAP49450 MFSD8-236ENST00000641509 4050 ntBASIC3.59□□□□□ -1.83
CENPAP49450 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CENPAP49450 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CENPAP49450 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CENPAP49450 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CENPAP49450 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CENPAP49450 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CENPAP49450 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CENPAP49450 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CENPAP49450 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.58□□□□□ -1.84
CENPAP49450 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 AC103988.1-201ENST00000566382 2177 ntBASIC3.58□□□□□ -1.84
CENPAP49450 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
CENPAP49450 MIR141-201ENST00000384975 95 ntBASIC3.58□□□□□ -1.84
CENPAP49450 RPL7P60-201ENST00000397636 735 ntBASIC3.58□□□□□ -1.84
CENPAP49450 RAB28P1-201ENST00000411517 641 ntBASIC3.58□□□□□ -1.84
CENPAP49450 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.58□□□□□ -1.84
CENPAP49450 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CENPAP49450 AC133104.1-201ENST00000429100 218 ntBASIC3.58□□□□□ -1.84
CENPAP49450 C8orf59P1-201ENST00000429930 303 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.58□□□□□ -1.84
CENPAP49450 MTND1P4-201ENST00000435196 415 ntBASIC3.58□□□□□ -1.84
CENPAP49450 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.58□□□□□ -1.84
CENPAP49450 HMGB1P37-201ENST00000439613 609 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.58□□□□□ -1.84
CENPAP49450 AL500522.2-201ENST00000448562 343 ntBASIC3.58□□□□□ -1.84
CENPAP49450 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.58□□□□□ -1.84
CENPAP49450 C1DP4-201ENST00000455429 424 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AL049714.1-201ENST00000466686 347 ntBASIC3.58□□□□□ -1.84
CENPAP49450 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CENPAP49450 AC006483.1-201ENST00000487308 313 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AC108078.1-201ENST00000508073 725 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.58□□□□□ -1.84
CENPAP49450 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 RNU1-61P-201ENST00000516107 151 ntBASIC3.58□□□□□ -1.84
CENPAP49450 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 AC091516.1-201ENST00000549191 703 ntBASIC3.58□□□□□ -1.84
CENPAP49450 BNIP3P5-201ENST00000562290 498 ntBASIC3.58□□□□□ -1.84
CENPAP49450 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.58□□□□□ -1.84
CENPAP49450 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.58□□□□□ -1.84
CENPAP49450 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.58□□□□□ -1.84
CENPAP49450 AC008745.1-201ENST00000604064 271 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AP000860.1-201ENST00000605250 559 ntBASIC3.58□□□□□ -1.84
CENPAP49450 MIR486-1-201ENST00000612171 68 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AL390240.1-201ENST00000612950 384 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AC093838.1-201ENST00000613014 469 ntBASIC3.58□□□□□ -1.84
CENPAP49450 AC073534.2-201ENST00000620377 381 ntBASIC3.58□□□□□ -1.84
CENPAP49450 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.58□□□□□ -1.84
CENPAP49450 MIR3653-201ENST00000625572 110 ntBASIC3.58□□□□□ -1.84
CENPAP49450 MIR7641-1-201ENST00000627518 61 ntBASIC3.58□□□□□ -1.84
CENPAP49450 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.58□□□□□ -1.84
CENPAP49450 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.58□□□□□ -1.84
CENPAP49450 OR5H6-203ENST00000642105 978 ntBASIC3.58□□□□□ -1.84
CENPAP49450 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CENPAP49450 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 RIOK3P1-201ENST00000418778 1528 ntBASIC3.58□□□□□ -1.84
CENPAP49450 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.58□□□□□ -1.84
CENPAP49450 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CENPAP49450 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CENPAP49450 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CENPAP49450 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CENPAP49450 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CENPAP49450 OR5J1P-201ENST00000313544 939 ntBASIC3.57□□□□□ -1.84
CENPAP49450 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.57□□□□□ -1.84
CENPAP49450 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CENPAP49450 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CENPAP49450 RNU6-223P-201ENST00000362830 107 ntBASIC3.57□□□□□ -1.84
CENPAP49450 RNU5E-8P-201ENST00000363502 116 ntBASIC3.57□□□□□ -1.84
CENPAP49450 RNU4-1-201ENST00000363925 141 ntBASIC3.57□□□□□ -1.84
CENPAP49450 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.57□□□□□ -1.84
CENPAP49450 AL109755.1-201ENST00000401791 649 ntBASIC3.57□□□□□ -1.84
CENPAP49450 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.57□□□□□ -1.84
CENPAP49450 RNA5SP107-201ENST00000411358 122 ntBASIC3.57□□□□□ -1.84
CENPAP49450 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.57□□□□□ -1.84
CENPAP49450 MTND3P17-201ENST00000416968 344 ntBASIC3.57□□□□□ -1.84
CENPAP49450 DPPA2P1-201ENST00000428060 556 ntBASIC3.57□□□□□ -1.84
CENPAP49450 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.57□□□□□ -1.84
CENPAP49450 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CENPAP49450 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.57□□□□□ -1.84
CENPAP49450 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.57□□□□□ -1.84
CENPAP49450 DNAJC19P4-201ENST00000440115 345 ntBASIC3.57□□□□□ -1.84
CENPAP49450 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.57□□□□□ -1.84
CENPAP49450 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.57□□□□□ -1.84
CENPAP49450 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.57□□□□□ -1.84
CENPAP49450 MTCO2P29-201ENST00000465212 189 ntBASIC3.57□□□□□ -1.84
CENPAP49450 AP002884.2-201ENST00000471647 395 ntBASIC3.57□□□□□ -1.84
CENPAP49450 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CENPAP49450 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CENPAP49450 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.57□□□□□ -1.84
CENPAP49450 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.57□□□□□ -1.84
CENPAP49450 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.57□□□□□ -1.84
CENPAP49450 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms