Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCNFP41002 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCNFP41002 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCNFP41002 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNFP41002 SNORA70-201ENST00000384436 135 ntBASIC4.83□□□□□ -1.64
CCNFP41002 RNU2-43P-201ENST00000410306 190 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.83□□□□□ -1.64
CCNFP41002 VDAC1P9-201ENST00000412766 841 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AC092809.3-201ENST00000415453 231 ntBASIC4.83□□□□□ -1.64
CCNFP41002 FAR2P4-202ENST00000425399 584 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNFP41002 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.83□□□□□ -1.64
CCNFP41002 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNFP41002 MTND3P2-201ENST00000438452 342 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNFP41002 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNFP41002 HMGB3P22-202ENST00000451823 572 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.83□□□□□ -1.64
CCNFP41002 RN7SL558P-201ENST00000497468 299 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AC008526.1-201ENST00000509149 338 ntBASIC4.83□□□□□ -1.64
CCNFP41002 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.83□□□□□ -1.64
CCNFP41002 RNU6-1213P-201ENST00000517075 94 ntBASIC4.83□□□□□ -1.64
CCNFP41002 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.83□□□□□ -1.64
CCNFP41002 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.83□□□□□ -1.64
CCNFP41002 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.83□□□□□ -1.64
CCNFP41002 AC044860.2-201ENST00000561005 179 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AC011487.3-201ENST00000593607 453 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AC020910.3-201ENST00000603701 874 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AC136443.5-201ENST00000603741 370 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AC091979.2-201ENST00000607514 214 ntBASIC4.83□□□□□ -1.64
CCNFP41002 AL022401.1-201ENST00000619498 108 ntBASIC4.83□□□□□ -1.64
CCNFP41002 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCNFP41002 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCNFP41002 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCNFP41002 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCNFP41002 MAPK10-263ENST00000641052 4307 ntBASIC4.83□□□□□ -1.64
CCNFP41002 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CCNFP41002 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.83□□□□□ -1.64
CCNFP41002 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
CCNFP41002 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCNFP41002 AC116667.1-201ENST00000604855 2072 ntBASIC4.82□□□□□ -1.64
CCNFP41002 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNFP41002 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.82□□□□□ -1.64
CCNFP41002 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNFP41002 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.82□□□□□ -1.64
CCNFP41002 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCNFP41002 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RNU6-288P-201ENST00000363690 104 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RNA5SP28-201ENST00000363841 119 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RNU6-715P-201ENST00000365204 103 ntBASIC4.82□□□□□ -1.64
CCNFP41002 Y_RNA.482-201ENST00000384377 111 ntBASIC4.82□□□□□ -1.64
CCNFP41002 SNORA16.2-201ENST00000390991 127 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RPS4XP7-201ENST00000406274 780 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RNA5SP146-201ENST00000410743 123 ntBASIC4.82□□□□□ -1.64
CCNFP41002 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.82□□□□□ -1.64
CCNFP41002 TBCAP2-201ENST00000416175 326 ntBASIC4.82□□□□□ -1.64
CCNFP41002 AF186996.5-201ENST00000418098 904 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RPL21P109-201ENST00000422213 475 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RPL31P12-201ENST00000422587 358 ntBASIC4.82□□□□□ -1.64
CCNFP41002 PDSS1P1-201ENST00000422953 1114 ntBASIC4.82□□□□□ -1.64
CCNFP41002 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.82□□□□□ -1.64
CCNFP41002 SKA2P1-201ENST00000425592 390 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RHOT1P3-201ENST00000436571 331 ntBASIC4.82□□□□□ -1.64
CCNFP41002 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNFP41002 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.82□□□□□ -1.64
CCNFP41002 RNU6-988P-201ENST00000519081 107 ntBASIC4.82□□□□□ -1.64
CCNFP41002 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNFP41002 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNFP41002 AC008489.1-201ENST00000524271 483 ntBASIC4.82□□□□□ -1.64
CCNFP41002 AP006587.4-201ENST00000526053 529 ntBASIC4.82□□□□□ -1.64
CCNFP41002 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNFP41002 DYNLL1P4-201ENST00000549314 266 ntBASIC4.82□□□□□ -1.64
CCNFP41002 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNFP41002 AL121603.1-201ENST00000553815 142 ntBASIC4.82□□□□□ -1.64
CCNFP41002 EDDM3DP-201ENST00000554692 434 ntBASIC4.82□□□□□ -1.64
CCNFP41002 OR4H12P-201ENST00000556269 907 ntBASIC4.82□□□□□ -1.64
CCNFP41002 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.82□□□□□ -1.64
CCNFP41002 MIR3671-201ENST00000580455 88 ntBASIC4.82□□□□□ -1.64
CCNFP41002 SNORA74C-1-201ENST00000580726 201 ntBASIC4.82□□□□□ -1.64
CCNFP41002 MIR3941-201ENST00000582572 103 ntBASIC4.82□□□□□ -1.64
CCNFP41002 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNFP41002 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.82□□□□□ -1.64
CCNFP41002 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNFP41002 AL157817.1-201ENST00000614264 790 ntBASIC4.82□□□□□ -1.64
CCNFP41002 AC133104.2-201ENST00000615272 193 ntBASIC4.82□□□□□ -1.64
CCNFP41002 MIR6128-201ENST00000615528 109 ntBASIC4.82□□□□□ -1.64
CCNFP41002 MIR7155-201ENST00000615925 56 ntBASIC4.82□□□□□ -1.64
CCNFP41002 SNX18P1Y-201ENST00000616231 511 ntBASIC4.82□□□□□ -1.64
CCNFP41002 uc_338.22-201ENST00000622722 187 ntBASIC4.82□□□□□ -1.64
CCNFP41002 AC068254.2-201ENST00000623938 3577 ntBASIC4.82□□□□□ -1.64
CCNFP41002 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNFP41002 ZNF519P1-201ENST00000449011 1626 ntBASIC4.82□□□□□ -1.64
CCNFP41002 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNFP41002 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
CCNFP41002 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCNFP41002 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNFP41002 MTND5P19-201ENST00000424872 1794 ntBASIC4.81□□□□□ -1.64
CCNFP41002 MTND5P16-201ENST00000460269 1703 ntBASIC4.81□□□□□ -1.64
CCNFP41002 Y_RNA.144-201ENST00000363521 113 ntBASIC4.81□□□□□ -1.64
CCNFP41002 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms