Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.96□□□□□ -1.77
CIITAP33076 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.96□□□□□ -1.77
CIITAP33076 AC097714.1-201ENST00000511272 1647 ntBASIC3.96□□□□□ -1.78
CIITAP33076 OR4G2P-201ENST00000328113 903 ntBASIC3.96□□□□□ -1.78
CIITAP33076 Y_RNA.46-201ENST00000362695 102 ntBASIC3.96□□□□□ -1.78
CIITAP33076 RPL7P25-201ENST00000404151 721 ntBASIC3.96□□□□□ -1.78
CIITAP33076 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.96□□□□□ -1.78
CIITAP33076 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.96□□□□□ -1.78
CIITAP33076 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.96□□□□□ -1.78
CIITAP33076 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.96□□□□□ -1.78
CIITAP33076 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.96□□□□□ -1.78
CIITAP33076 AL159987.2-201ENST00000432754 307 ntBASIC3.96□□□□□ -1.78
CIITAP33076 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.96□□□□□ -1.78
CIITAP33076 AC127537.2-201ENST00000439258 465 ntBASIC3.96□□□□□ -1.78
CIITAP33076 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.96□□□□□ -1.78
CIITAP33076 NIPA2P2-201ENST00000496376 1083 ntBASIC3.96□□□□□ -1.78
CIITAP33076 RNU2-46P-201ENST00000517038 113 ntBASIC3.96□□□□□ -1.78
CIITAP33076 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.96□□□□□ -1.78
CIITAP33076 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.96□□□□□ -1.78
CIITAP33076 OR5D17P-201ENST00000531492 978 ntBASIC3.96□□□□□ -1.78
CIITAP33076 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.96□□□□□ -1.78
CIITAP33076 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.96□□□□□ -1.78
CIITAP33076 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.96□□□□□ -1.78
CIITAP33076 AC099489.2-201ENST00000574976 260 ntBASIC3.96□□□□□ -1.78
CIITAP33076 AL022154.1-201ENST00000604698 785 ntBASIC3.96□□□□□ -1.78
CIITAP33076 RBM11P1-201ENST00000604951 799 ntBASIC3.96□□□□□ -1.78
CIITAP33076 MIR92B-201ENST00000607575 96 ntBASIC3.96□□□□□ -1.78
CIITAP33076 U6atac.1-201ENST00000616025 117 ntBASIC3.96□□□□□ -1.78
CIITAP33076 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.96□□□□□ -1.78
CIITAP33076 U6.105-201ENST00000637379 88 ntBASIC3.96□□□□□ -1.78
CIITAP33076 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CIITAP33076 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CIITAP33076 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.96□□□□□ -1.78
CIITAP33076 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CIITAP33076 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CIITAP33076 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CIITAP33076 AP001350.1-201ENST00000601906 1524 ntBASIC3.95□□□□□ -1.78
CIITAP33076 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.95□□□□□ -1.78
CIITAP33076 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CIITAP33076 AL133383.2-201ENST00000622958 2336 ntBASIC3.95□□□□□ -1.78
CIITAP33076 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CIITAP33076 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CIITAP33076 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CIITAP33076 AC006504.1-201ENST00000562493 3666 ntBASIC3.95□□□□□ -1.78
CIITAP33076 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CIITAP33076 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CIITAP33076 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CIITAP33076 RNU5A-6P-201ENST00000384136 116 ntBASIC3.95□□□□□ -1.78
CIITAP33076 Y_RNA.554-201ENST00000384672 102 ntBASIC3.95□□□□□ -1.78
CIITAP33076 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CIITAP33076 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CIITAP33076 Z98941.1-201ENST00000407764 100 ntBASIC3.95□□□□□ -1.78
CIITAP33076 RNU2-37P-201ENST00000410695 177 ntBASIC3.95□□□□□ -1.78
CIITAP33076 AC078974.1-201ENST00000411597 223 ntBASIC3.95□□□□□ -1.78
CIITAP33076 RPS7P15-201ENST00000415804 584 ntBASIC3.95□□□□□ -1.78
CIITAP33076 EIF1P1-201ENST00000421436 341 ntBASIC3.95□□□□□ -1.78
CIITAP33076 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.95□□□□□ -1.78
CIITAP33076 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 AC003071.1-201ENST00000451219 789 ntBASIC3.95□□□□□ -1.78
CIITAP33076 HMGN2P7-201ENST00000456186 273 ntBASIC3.95□□□□□ -1.78
CIITAP33076 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.95□□□□□ -1.78
CIITAP33076 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.95□□□□□ -1.78
CIITAP33076 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CIITAP33076 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 MTCO2P4-201ENST00000517968 247 ntBASIC3.95□□□□□ -1.78
CIITAP33076 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.95□□□□□ -1.78
CIITAP33076 AP003181.2-201ENST00000528941 181 ntBASIC3.95□□□□□ -1.78
CIITAP33076 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 AL157394.1-201ENST00000562983 1224 ntBASIC3.95□□□□□ -1.78
CIITAP33076 AC137800.2-201ENST00000574375 120 ntBASIC3.95□□□□□ -1.78
CIITAP33076 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.95□□□□□ -1.78
CIITAP33076 TPMTP1-201ENST00000592307 737 ntBASIC3.95□□□□□ -1.78
CIITAP33076 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.95□□□□□ -1.78
CIITAP33076 AC006329.2-201ENST00000611491 394 ntBASIC3.95□□□□□ -1.78
CIITAP33076 AC090517.2-201ENST00000614966 680 ntBASIC3.95□□□□□ -1.78
CIITAP33076 AC136475.10-201ENST00000620253 385 ntBASIC3.95□□□□□ -1.78
CIITAP33076 SEPT14P19-203ENST00000633205 211 ntBASIC3.95□□□□□ -1.78
CIITAP33076 OR5H6-203ENST00000642105 978 ntBASIC3.95□□□□□ -1.78
CIITAP33076 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CIITAP33076 AC004925.1-201ENST00000624256 2706 ntBASIC3.95□□□□□ -1.78
CIITAP33076 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CIITAP33076 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CIITAP33076 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CIITAP33076 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CIITAP33076 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.94□□□□□ -1.78
CIITAP33076 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CIITAP33076 RNU6-28P-201ENST00000362378 107 ntBASIC3.94□□□□□ -1.78
CIITAP33076 RNU4-35P-201ENST00000362588 141 ntBASIC3.94□□□□□ -1.78
CIITAP33076 RNU6-878P-201ENST00000384578 110 ntBASIC3.94□□□□□ -1.78
CIITAP33076 MIR490-201ENST00000384865 128 ntBASIC3.94□□□□□ -1.78
CIITAP33076 RHEBP3-201ENST00000411920 351 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.94□□□□□ -1.78
CIITAP33076 MTND1P23-201ENST00000416931 372 ntBASIC3.94□□□□□ -1.78
CIITAP33076 C1DP2-201ENST00000418167 426 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms