Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDH3P22223 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH3P22223 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 RNU4-21P-201ENST00000362802 126 ntBASIC3.33□□□□□ -1.88
CDH3P22223 RNA5SP383-201ENST00000362934 120 ntBASIC3.33□□□□□ -1.88
CDH3P22223 RNA5SP387-201ENST00000364226 106 ntBASIC3.33□□□□□ -1.88
CDH3P22223 RNU6-359P-201ENST00000365466 108 ntBASIC3.33□□□□□ -1.88
CDH3P22223 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 U8.14-201ENST00000390843 143 ntBASIC3.33□□□□□ -1.88
CDH3P22223 NDUFB4P5-201ENST00000415445 361 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH3P22223 RPS27AP14-201ENST00000422868 454 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AC244035.1-201ENST00000430042 390 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH3P22223 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH3P22223 GDI2P2-201ENST00000445131 608 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AL122001.1-201ENST00000457027 370 ntBASIC3.33□□□□□ -1.88
CDH3P22223 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH3P22223 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
CDH3P22223 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH3P22223 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH3P22223 AC060788.1-201ENST00000521318 469 ntBASIC3.33□□□□□ -1.88
CDH3P22223 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CDH3P22223 CR383656.7-201ENST00000548164 174 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH3P22223 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH3P22223 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AL590099.1-201ENST00000615276 138 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AC006111.3-201ENST00000622137 383 ntBASIC3.33□□□□□ -1.88
CDH3P22223 AC026422.1-201ENST00000623961 452 ntBASIC3.33□□□□□ -1.88
CDH3P22223 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH3P22223 CRYM-AS1-204ENST00000637983 556 ntBASIC3.33□□□□□ -1.88
CDH3P22223 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH3P22223 AC092435.3-201ENST00000565538 3654 ntBASIC3.32□□□□□ -1.88
CDH3P22223 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH3P22223 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH3P22223 RNU6-1155P-201ENST00000363554 107 ntBASIC3.32□□□□□ -1.88
CDH3P22223 RNU6-853P-201ENST00000364306 107 ntBASIC3.32□□□□□ -1.88
CDH3P22223 RNVU1-14-201ENST00000384770 164 ntBASIC3.32□□□□□ -1.88
CDH3P22223 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CDH3P22223 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH3P22223 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH3P22223 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH3P22223 RPL21P32-201ENST00000419877 477 ntBASIC3.32□□□□□ -1.88
CDH3P22223 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 AC005019.1-201ENST00000436455 431 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH3P22223 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH3P22223 SNORD121B-201ENST00000458838 81 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH3P22223 AC021382.1-201ENST00000483523 359 ntBASIC3.32□□□□□ -1.88
CDH3P22223 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
CDH3P22223 DSTNP2-201ENST00000504533 515 ntBASIC3.32□□□□□ -1.88
CDH3P22223 FCF1P8-201ENST00000510322 597 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH3P22223 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH3P22223 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
CDH3P22223 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH3P22223 AC034268.2-201ENST00000571784 482 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH3P22223 UBE2L4-201ENST00000587688 464 ntBASIC3.32□□□□□ -1.88
CDH3P22223 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH3P22223 AL590229.1-201ENST00000603497 542 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AL358072.1-201ENST00000604156 575 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AC012468.1-201ENST00000604888 430 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AC007179.3-201ENST00000604976 235 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AC002550.2-201ENST00000621246 394 ntBASIC3.32□□□□□ -1.88
CDH3P22223 AL158801.5-201ENST00000623123 465 ntBASIC3.32□□□□□ -1.88
CDH3P22223 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH3P22223 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH3P22223 MTND5P1-201ENST00000445440 1375 ntBASIC3.32□□□□□ -1.88
CDH3P22223 ELL2P3-201ENST00000457883 1602 ntBASIC3.32□□□□□ -1.88
CDH3P22223 MFSD8-233ENST00000641482 4860 ntBASIC3.32□□□□□ -1.88
CDH3P22223 MAPK10-322ENST00000641485 4530 ntBASIC3.31□□□□□ -1.88
CDH3P22223 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH3P22223 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CDH3P22223 RNU6-97P-201ENST00000363387 104 ntBASIC3.31□□□□□ -1.88
CDH3P22223 RNU1-33P-201ENST00000364249 162 ntBASIC3.31□□□□□ -1.88
CDH3P22223 Y_RNA.333-201ENST00000365274 102 ntBASIC3.31□□□□□ -1.88
CDH3P22223 BX323014.1-201ENST00000412876 237 ntBASIC3.31□□□□□ -1.88
CDH3P22223 SDCBPP3-201ENST00000419629 891 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AC099677.1-201ENST00000420575 175 ntBASIC3.31□□□□□ -1.88
CDH3P22223 CYCSP46-201ENST00000423569 204 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms