Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 RNU6-533P-201ENST00000384144 107 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 MIR493-201ENST00000385254 89 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 RPS20P2-201ENST00000402520 389 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AL021407.1-201ENST00000404531 386 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AL591034.1-201ENST00000407447 340 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC009518.2-201ENST00000418056 731 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 RPL27AP8-201ENST00000424277 446 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC091390.3-201ENST00000426478 338 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC118469.1-201ENST00000442943 488 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 RNU7-170P-201ENST00000459303 61 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AP000797.1-201ENST00000478870 387 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 HSPE1P6-201ENST00000479457 291 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC055855.1-201ENST00000489563 579 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 FCF1P8-201ENST00000510322 597 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 TGIF1P1-201ENST00000558095 802 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC083760.1-201ENST00000589621 670 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC105129.3-201ENST00000605455 485 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC007038.2-201ENST00000608095 740 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AC027807.2-201ENST00000616099 408 ntBASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB40ALP0C0E4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC058791.1-201ENST00000608412 3198 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 RNU6-223P-201ENST00000362830 107 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 SNORA38.1-201ENST00000364172 131 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 SNORA23-201ENST00000365128 182 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 MIR19A-201ENST00000384878 82 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC078974.1-201ENST00000411597 223 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 RPL17P12-201ENST00000413391 526 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 UBE2FP1-201ENST00000416536 447 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC090960.1-201ENST00000421072 306 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL159169.1-201ENST00000421119 127 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 RPL7L1P10-201ENST00000427790 463 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 TXNP1-201ENST00000441872 371 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL162389.1-201ENST00000449233 177 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL049714.1-201ENST00000466686 347 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL049874.1-201ENST00000489560 388 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 GMPSP1-201ENST00000514075 579 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 IGKV2-26-201ENST00000518305 343 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AP000857.1-201ENST00000532151 543 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL355472.4-201ENST00000610233 626 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC093838.1-201ENST00000613014 469 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AC068057.2-201ENST00000624047 895 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 U6.98-201ENST00000637157 84 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 AL138713.1-201ENST00000624026 2130 ntBASIC3.26□□□□□ -1.89
RAB40ALP0C0E4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RAB40ALP0C0E4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAB40ALP0C0E4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAB40ALP0C0E4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.25□□□□□ -1.89
RAB40ALP0C0E4 RNA5SP295-201ENST00000362655 121 ntBASIC3.25□□□□□ -1.89
RAB40ALP0C0E4 SNORA26.8-201ENST00000391306 124 ntBASIC3.25□□□□□ -1.89
RAB40ALP0C0E4 AL109755.1-201ENST00000401791 649 ntBASIC3.25□□□□□ -1.89
RAB40ALP0C0E4 AL136116.1-201ENST00000403591 381 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms