Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC090229.1-201ENST00000590983 1609 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPGEF3O95398 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPGEF3O95398 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAPGEF3O95398 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPGEF3O95398 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPGEF3O95398 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPGEF3O95398 RNA5SP235-201ENST00000365411 114 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 RPS3AP36-201ENST00000398190 775 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 CIR1P3-201ENST00000405137 479 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 AC078974.1-201ENST00000411597 223 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 BX295541.1-201ENST00000417774 250 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 RPL35AP12-201ENST00000425362 338 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 AC011742.1-201ENST00000431448 434 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 UBE2V1P13-201ENST00000436983 439 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 MTAPP1-201ENST00000489154 819 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 AC005798.1-201ENST00000513715 387 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 RN7SKP234-201ENST00000517173 224 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 AC121334.2-201ENST00000605387 271 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 AC079597.1-201ENST00000624306 508 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPGEF3O95398 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RAPGEF3O95398 ELF2P3-201ENST00000445099 1506 ntBASIC5.18□□□□□ -1.58
RAPGEF3O95398 IPO8P1-201ENST00000455509 3109 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAPGEF3O95398 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAPGEF3O95398 LINC01355-201ENST00000566551 5444 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 OR52B1P-201ENST00000316506 909 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 RNU6-339P-201ENST00000384310 107 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 U3.20-201ENST00000390909 217 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 U3.29-201ENST00000391296 212 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 BTF3P7-201ENST00000407097 488 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 ISCA1P6-201ENST00000427740 390 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AL139415.2-201ENST00000431968 163 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC005008.1-201ENST00000456151 612 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AL359385.1-201ENST00000456509 365 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 RPL37P6-202ENST00000464216 403 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 RBM43P1-201ENST00000476891 1081 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC021382.1-201ENST00000483523 359 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC114967.1-201ENST00000504890 259 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 COX7A2P2-201ENST00000505291 250 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 MTCO3P44-201ENST00000510977 541 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC234778.2-201ENST00000566241 354 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 AC068880.5-201ENST00000624331 290 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 MTND5P33-201ENST00000571250 1450 ntBASIC5.17□□□□□ -1.58
RAPGEF3O95398 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RAPGEF3O95398 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAPGEF3O95398 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAPGEF3O95398 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAPGEF3O95398 RNU6-1103P-201ENST00000384150 107 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 MT-TC-201ENST00000387405 66 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 RPL23AP32-201ENST00000395315 459 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 AC022028.1-201ENST00000412054 408 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 RPL23AP69-201ENST00000431134 458 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 RBMX2P4-201ENST00000441256 376 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 MTATP6P30-201ENST00000443540 664 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 MTCO3P20-201ENST00000454926 688 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 MTCO3P38-201ENST00000468910 766 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAPGEF3O95398 PPBPP1-201ENST00000510807 373 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 AP003181.2-201ENST00000528941 181 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 AC004853.1-201ENST00000604902 698 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 AL365503.1-201ENST00000605247 905 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.16□□□□□ -1.58
RAPGEF3O95398 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.16□□□□□ -1.58
RAPGEF3O95398 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.15□□□□□ -1.58
RAPGEF3O95398 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms