Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40AO75400 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40AO75400 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40AO75400 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF40AO75400 MAPK10-263ENST00000641052 4307 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PRPF40AO75400 Y_RNA.167-201ENST00000363735 109 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 RNU6-1127P-201ENST00000384580 107 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 RNA5SP219-201ENST00000390940 113 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 RN7SKP216-201ENST00000411050 312 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 AC104058.1-201ENST00000448028 297 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF40AO75400 HIGD1AP13-201ENST00000509878 289 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.32□□□□□ -1.56
PRPF40AO75400 RNU6-1170P-201ENST00000515974 106 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 SNORA25.17-201ENST00000517184 124 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 AC090136.1-201ENST00000520009 240 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 AC021006.3-201ENST00000530771 192 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF40AO75400 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PRPF40AO75400 AC007619.2-201ENST00000605743 379 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 FAM27B-201ENST00000610601 213 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 U2.17-201ENST00000611454 95 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF40AO75400 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PRPF40AO75400 AL445363.3-201ENST00000623080 671 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 AL391684.1-202ENST00000641293 1636 ntBASIC5.32□□□□□ -1.56
PRPF40AO75400 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
PRPF40AO75400 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PRPF40AO75400 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40AO75400 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF40AO75400 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40AO75400 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40AO75400 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40AO75400 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF40AO75400 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40AO75400 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PRPF40AO75400 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40AO75400 Y_RNA.162-201ENST00000363683 102 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 RNU6-76P-201ENST00000384060 104 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AC114755.2-201ENST00000413520 361 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AL353729.1-201ENST00000425044 720 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AL049745.1-201ENST00000433953 286 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AC008897.1-201ENST00000494006 347 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AC025164.1-201ENST00000496249 478 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 RPS27AP13-201ENST00000498403 237 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 VN1R104P-201ENST00000505115 1009 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF40AO75400 PPBPP1-201ENST00000510807 373 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 RNU1-6P-201ENST00000516290 144 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 Y_RNA.689-201ENST00000516589 107 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF40AO75400 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PRPF40AO75400 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40AO75400 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF40AO75400 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF40AO75400 AC067852.3-201ENST00000589177 561 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40AO75400 APOOP1-201ENST00000604695 592 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AC009570.1-201ENST00000609599 745 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF40AO75400 AC090971.5-201ENST00000621102 293 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 AC091905.2-201ENST00000623143 306 ntBASIC5.31□□□□□ -1.56
PRPF40AO75400 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF40AO75400 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF40AO75400 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PRPF40AO75400 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PRPF40AO75400 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 RNA5SP52-201ENST00000362448 134 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 Y_RNA.138-201ENST00000363462 102 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 RNU6-692P-201ENST00000384496 107 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 MIR124-3-201ENST00000384866 87 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 CISD1P1-201ENST00000393907 327 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF40AO75400 MIR548F5-201ENST00000408421 86 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AC074085.1-201ENST00000413598 418 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AL139396.1-201ENST00000421137 167 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AC005019.1-201ENST00000436455 431 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40AO75400 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40AO75400 H2AFZP5-201ENST00000446960 382 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF40AO75400 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF40AO75400 RNU6-953P-201ENST00000459154 107 ntBASIC5.3□□□□□ -1.56
PRPF40AO75400 AC092324.1-201ENST00000468671 324 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms