Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 USP9YP34-201ENST00000453983 808 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 MTCO3P44-201ENST00000510977 541 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AP004371.1-201ENST00000525240 214 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP4O75161 MIR4255-201ENST00000579351 72 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP4O75161 AC025588.3-201ENST00000604182 274 ntBASIC2.76□□□□□ -1.97
NPHP4O75161 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP4O75161 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.76□□□□□ -1.97
NPHP4O75161 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
NPHP4O75161 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
NPHP4O75161 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPHP4O75161 MTND4P34-201ENST00000572715 1371 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 RNU6-650P-201ENST00000365658 111 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 MIR525-201ENST00000384978 85 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 MIR1276-201ENST00000408707 83 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 RPP40P1-201ENST00000426762 456 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 AC093422.3-201ENST00000428506 305 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.75□□□□□ -1.97
NPHP4O75161 HMGB1P12-201ENST00000438594 598 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 DNAJC19P4-201ENST00000440115 345 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
NPHP4O75161 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP4O75161 HMGB1P22-201ENST00000505315 124 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 AC010468.3-201ENST00000508225 458 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.75□□□□□ -1.97
NPHP4O75161 RNU6-488P-201ENST00000515918 99 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP4O75161 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.75□□□□□ -1.97
NPHP4O75161 AC104229.1-201ENST00000561364 255 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 ZNF92P2-201ENST00000600543 1059 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.75□□□□□ -1.97
NPHP4O75161 SNRPGP19-201ENST00000603826 189 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 KATNBL1P5-201ENST00000605015 517 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.75□□□□□ -1.97
NPHP4O75161 MFSD8-213ENST00000641134 1327 ntBASIC2.75□□□□□ -1.97
NPHP4O75161 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPHP4O75161 AC110774.1-201ENST00000623567 2018 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP4O75161 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
NPHP4O75161 SNORA51.2-201ENST00000364595 132 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP4O75161 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP4O75161 RNU6-441P-201ENST00000384545 106 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 SNORA67.5-201ENST00000391036 107 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 MIR1250-201ENST00000408098 113 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP4O75161 RNU6-77P-201ENST00000410554 91 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 RNU4-27P-201ENST00000410889 139 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 AC092638.1-201ENST00000411966 1275 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP4O75161 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP4O75161 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP4O75161 MOB1AP2-201ENST00000446060 614 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 BX248409.1-201ENST00000455497 255 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 NF1P3-201ENST00000457709 450 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 AC010285.1-201ENST00000470580 392 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 OR52A4P-202ENST00000481634 799 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 RPS29P11-201ENST00000496507 171 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 RNU6-416P-201ENST00000516265 103 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 RNU6-250P-201ENST00000516958 103 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 HIGD1AP6-201ENST00000521833 279 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.74□□□□□ -1.97
NPHP4O75161 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP4O75161 AL163153.1-201ENST00000554223 283 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 AC023824.3-201ENST00000569003 562 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 MIR5089-201ENST00000580047 84 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP4O75161 AP001350.1-201ENST00000601906 1524 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 AC073387.2-201ENST00000604797 784 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 BX248123.2-201ENST00000606318 124 ntBASIC2.74□□□□□ -1.97
NPHP4O75161 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP4O75161 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP4O75161 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP4O75161 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPHP4O75161 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPHP4O75161 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NPHP4O75161 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP4O75161 SSXP10-201ENST00000402595 565 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AC104332.2-201ENST00000429959 156 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP4O75161 AL512661.1-201ENST00000434586 1253 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AC092170.1-201ENST00000440211 356 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 RPL23AP58-201ENST00000440453 469 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 RPS26P56-201ENST00000444468 240 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AL929288.2-201ENST00000446368 407 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AL109741.2-201ENST00000455561 343 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.73□□□□□ -1.97
NPHP4O75161 AC007182.2-201ENST00000489251 402 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 RNF138P1-201ENST00000502765 546 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP4O75161 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.73□□□□□ -1.97
NPHP4O75161 AC109635.4-202ENST00000531666 412 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 AP000889.2-201ENST00000532684 490 ntBASIC2.73□□□□□ -1.97
NPHP4O75161 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms