Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
SMAD6O43541 AC006026.1-201ENST00000444025 1803 ntBASIC3.77□□□□□ -1.81
SMAD6O43541 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMAD6O43541 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMAD6O43541 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
SMAD6O43541 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMAD6O43541 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SMAD6O43541 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMAD6O43541 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.76□□□□□ -1.81
SMAD6O43541 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMAD6O43541 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.76□□□□□ -1.81
SMAD6O43541 RNU6-1085P-201ENST00000363576 107 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 SNORA51.2-201ENST00000364595 132 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 MIR200C-201ENST00000384980 68 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 RNA5SP171-201ENST00000391071 115 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 MIR320C1-201ENST00000408566 88 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.76□□□□□ -1.81
SMAD6O43541 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 HMGB3P20-201ENST00000417997 600 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.76□□□□□ -1.81
SMAD6O43541 AL445669.1-201ENST00000426743 755 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.76□□□□□ -1.81
SMAD6O43541 MTND5P14-201ENST00000441481 1267 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 C1DP4-201ENST00000455429 424 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AL136097.1-201ENST00000456945 913 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 PMCHL2-203ENST00000457791 237 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 MTND1P3-201ENST00000484956 952 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC106872.3-201ENST00000495104 446 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC112204.1-201ENST00000502591 103 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 HMGN1P11-201ENST00000508668 303 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC104619.4-201ENST00000510773 249 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.76□□□□□ -1.81
SMAD6O43541 LRRC34P2-201ENST00000514850 553 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 RNU6-202P-201ENST00000515998 96 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 Y_RNA.693-201ENST00000516641 110 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 ARL2BPP5-201ENST00000523141 481 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.76□□□□□ -1.81
SMAD6O43541 AF235103.2-201ENST00000525753 346 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.76□□□□□ -1.81
SMAD6O43541 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.76□□□□□ -1.81
SMAD6O43541 MIR3682-201ENST00000581338 84 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 HMGN1P30-201ENST00000589286 268 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 AC005261.5-201ENST00000596280 355 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 BNIP3P11-201ENST00000603878 563 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 MIR8058-201ENST00000615737 89 ntBASIC3.76□□□□□ -1.81
SMAD6O43541 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMAD6O43541 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.76□□□□□ -1.81
SMAD6O43541 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMAD6O43541 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 XPOTP1-201ENST00000443317 2398 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMAD6O43541 SNORA71.3-201ENST00000362582 128 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNU6-289P-201ENST00000364093 107 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNU1-85P-201ENST00000364127 164 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNU6-1293P-201ENST00000384077 107 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNU6-1103P-201ENST00000384150 107 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNU6-769P-201ENST00000384407 104 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNU2-21P-201ENST00000410368 188 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 SPA17P1-201ENST00000416656 452 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 PIGFP2-201ENST00000421400 651 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.75□□□□□ -1.81
SMAD6O43541 AC233981.1-201ENST00000423224 461 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.75□□□□□ -1.81
SMAD6O43541 AC002486.1-201ENST00000435098 391 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AC104850.1-201ENST00000435940 476 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.75□□□□□ -1.81
SMAD6O43541 ARPC3P1-201ENST00000437218 533 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 SETP5-201ENST00000437270 562 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AC006480.1-201ENST00000449887 378 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 AC099563.1-201ENST00000456086 418 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RPS15AP1-201ENST00000457423 391 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.75□□□□□ -1.81
SMAD6O43541 AC010493.1-201ENST00000513479 292 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNA5SP143-201ENST00000516936 115 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AC026403.1-201ENST00000518938 295 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.75□□□□□ -1.81
SMAD6O43541 AP000790.1-201ENST00000528891 737 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.75□□□□□ -1.81
SMAD6O43541 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.75□□□□□ -1.81
SMAD6O43541 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.75□□□□□ -1.81
SMAD6O43541 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.75□□□□□ -1.81
SMAD6O43541 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.75□□□□□ -1.81
SMAD6O43541 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 AL035413.2-201ENST00000604801 525 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms