Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC026333.2-201ENST00000542164 106 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 MIR4738-201ENST00000579134 87 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AC060771.1-201ENST00000582031 164 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AC067852.3-201ENST00000589177 561 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AC068313.1-201ENST00000604028 1008 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AC106791.2-201ENST00000604680 391 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AL592295.2-201ENST00000612578 206 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AC140725.3-201ENST00000616193 880 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AL355493.4-201ENST00000618530 292 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AL159972.1-201ENST00000625150 448 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AC099063.3-201ENST00000642066 185 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPHP1O15259 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NPHP1O15259 AC011460.1-201ENST00000636268 1834 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.13□□□□□ -1.75
NPHP1O15259 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPHP1O15259 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPHP1O15259 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.13□□□□□ -1.75
NPHP1O15259 MTND4P16-201ENST00000466108 1367 ntBASIC4.13□□□□□ -1.75
NPHP1O15259 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPHP1O15259 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPHP1O15259 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.12□□□□□ -1.75
NPHP1O15259 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP1O15259 SDAD1P2-201ENST00000441308 2028 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 MTND5P33-201ENST00000571250 1450 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NPHP1O15259 SNORA80A-201ENST00000363922 136 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 EI24P2-201ENST00000397776 1076 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP1O15259 MIR1289-1-201ENST00000408836 144 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 AC126124.2-201ENST00000413542 321 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 HMGB3P23-201ENST00000414981 585 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.12□□□□□ -1.75
NPHP1O15259 AC022018.1-201ENST00000430685 241 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 HIGD1AP11-201ENST00000438361 280 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP1O15259 AL049714.1-201ENST00000466686 347 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 AC097462.2-201ENST00000504623 481 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP1O15259 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.12□□□□□ -1.75
NPHP1O15259 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.12□□□□□ -1.75
NPHP1O15259 RNU6-1129P-201ENST00000515964 104 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.12□□□□□ -1.75
NPHP1O15259 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP1O15259 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP1O15259 ZNF321P-202ENST00000550843 495 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.12□□□□□ -1.75
NPHP1O15259 AC103710.4-201ENST00000609301 899 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 MIR4275-201ENST00000636486 87 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 AC007671.2-201ENST00000637344 619 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.12□□□□□ -1.75
NPHP1O15259 AC068647.1-201ENST00000489539 2265 ntBASIC4.12□□□□□ -1.75
NPHP1O15259 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP1O15259 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP1O15259 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.12□□□□□ -1.75
NPHP1O15259 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPHP1O15259 AL513302.2-201ENST00000562313 1842 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 CR383658.2-201ENST00000547576 1525 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP1O15259 AL356274.2-201ENST00000624379 3752 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 RNU6-754P-201ENST00000391166 107 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 FAT1P1-201ENST00000406588 507 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 RNU6-516P-201ENST00000411381 104 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 AL359704.1-201ENST00000411586 781 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.11□□□□□ -1.75
NPHP1O15259 HMGB1P11-201ENST00000413899 637 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.11□□□□□ -1.75
NPHP1O15259 AC011233.1-201ENST00000422812 283 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 USP9YP36-201ENST00000424581 829 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.11□□□□□ -1.75
NPHP1O15259 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
NPHP1O15259 AC008264.1-201ENST00000447612 367 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 MRPS31P2-201ENST00000451581 518 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 LINC00888-204ENST00000487386 421 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.11□□□□□ -1.75
NPHP1O15259 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.11□□□□□ -1.75
NPHP1O15259 RNU6-798P-201ENST00000516912 103 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.11□□□□□ -1.75
NPHP1O15259 AL133271.1-201ENST00000538229 291 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 AC005476.1-201ENST00000554427 397 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 OR4T1P-201ENST00000554933 911 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 AC011260.1-201ENST00000578420 472 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.11□□□□□ -1.75
NPHP1O15259 RNVU1-4-201ENST00000612985 164 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP1O15259 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP1O15259 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPHP1O15259 RIOK3P1-201ENST00000418778 1528 ntBASIC4.11□□□□□ -1.75
NPHP1O15259 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NPHP1O15259 AC006378.2-201ENST00000623178 2476 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP1O15259 RPS4XP3-201ENST00000398541 413 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 RNU6-1077P-201ENST00000410506 102 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP1O15259 AC018630.2-202ENST00000422992 927 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AL593851.1-201ENST00000426171 157 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 BX890604.2-201ENST00000427883 474 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 MTND5P2-201ENST00000442927 1142 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms