Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 OR8K4P-201ENST00000534608 872 ntBASIC3.68□□□□□ -1.82
CUX2O14529 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.68□□□□□ -1.82
CUX2O14529 RNU6-6P-201ENST00000606623 107 ntBASIC3.68□□□□□ -1.82
CUX2O14529 AC068880.4-201ENST00000623082 495 ntBASIC3.68□□□□□ -1.82
CUX2O14529 AC093875.1-201ENST00000623688 504 ntBASIC3.68□□□□□ -1.82
CUX2O14529 AC004943.3-201ENST00000624116 600 ntBASIC3.68□□□□□ -1.82
CUX2O14529 AC233981.2-201ENST00000611524 1614 ntBASIC3.68□□□□□ -1.82
CUX2O14529 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.67□□□□□ -1.82
CUX2O14529 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.67□□□□□ -1.82
CUX2O14529 RPL39P40-201ENST00000445481 146 ntBASIC3.67□□□□□ -1.82
CUX2O14529 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.67□□□□□ -1.82
CUX2O14529 NAP1L1P3-201ENST00000462291 880 ntBASIC3.67□□□□□ -1.82
CUX2O14529 RPL23AP62-201ENST00000463396 453 ntBASIC3.67□□□□□ -1.82
CUX2O14529 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.67□□□□□ -1.82
CUX2O14529 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CUX2O14529 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.67□□□□□ -1.82
CUX2O14529 AL020997.3-201ENST00000602843 359 ntBASIC3.67□□□□□ -1.82
CUX2O14529 PVT1_3.1-201ENST00000620853 95 ntBASIC3.67□□□□□ -1.82
CUX2O14529 MIR6132-201ENST00000622083 109 ntBASIC3.67□□□□□ -1.82
CUX2O14529 AL359740.1-201ENST00000624340 592 ntBASIC3.67□□□□□ -1.82
CUX2O14529 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.67□□□□□ -1.82
CUX2O14529 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.67□□□□□ -1.82
CUX2O14529 SGO1P1-201ENST00000603525 1447 ntBASIC3.67□□□□□ -1.82
CUX2O14529 MIR6073-201ENST00000352083 89 ntBASIC3.67□□□□□ -1.82
CUX2O14529 SNORA63.3-201ENST00000362682 132 ntBASIC3.67□□□□□ -1.82
CUX2O14529 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CUX2O14529 TMSB4XP8-201ENST00000402089 135 ntBASIC3.67□□□□□ -1.82
CUX2O14529 AL021407.1-201ENST00000404531 386 ntBASIC3.67□□□□□ -1.82
CUX2O14529 TMSB4XP6-201ENST00000415187 135 ntBASIC3.67□□□□□ -1.82
CUX2O14529 RPL7P53-201ENST00000421245 739 ntBASIC3.67□□□□□ -1.82
CUX2O14529 TMSB4XP1-201ENST00000424567 135 ntBASIC3.67□□□□□ -1.82
CUX2O14529 AC234064.1-201ENST00000436312 247 ntBASIC3.67□□□□□ -1.82
CUX2O14529 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.67□□□□□ -1.82
CUX2O14529 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.67□□□□□ -1.82
CUX2O14529 AC011352.3-201ENST00000505162 593 ntBASIC3.67□□□□□ -1.82
CUX2O14529 U73479.1-201ENST00000618062 168 ntBASIC3.67□□□□□ -1.82
CUX2O14529 AC009831.4-201ENST00000620744 325 ntBASIC3.67□□□□□ -1.82
CUX2O14529 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.67□□□□□ -1.82
CUX2O14529 AC006065.5-201ENST00000623427 349 ntBASIC3.67□□□□□ -1.82
CUX2O14529 AL121594.5-201ENST00000631724 573 ntBASIC3.67□□□□□ -1.82
CUX2O14529 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CUX2O14529 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CUX2O14529 SEPT7P7-201ENST00000420492 1301 ntBASIC3.66□□□□□ -1.82
CUX2O14529 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CUX2O14529 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CUX2O14529 DEFA7P-201ENST00000382676 285 ntBASIC3.66□□□□□ -1.82
CUX2O14529 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.66□□□□□ -1.82
CUX2O14529 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.66□□□□□ -1.82
CUX2O14529 AC096632.1-201ENST00000427395 310 ntBASIC3.66□□□□□ -1.82
CUX2O14529 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.66□□□□□ -1.82
CUX2O14529 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.66□□□□□ -1.82
CUX2O14529 AL096829.2-201ENST00000446582 742 ntBASIC3.66□□□□□ -1.82
CUX2O14529 RNF138P1-201ENST00000502765 546 ntBASIC3.66□□□□□ -1.82
CUX2O14529 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.66□□□□□ -1.82
CUX2O14529 AC104057.1-201ENST00000515547 497 ntBASIC3.66□□□□□ -1.82
CUX2O14529 AC074051.3-201ENST00000570238 358 ntBASIC3.66□□□□□ -1.82
CUX2O14529 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.66□□□□□ -1.82
CUX2O14529 AC016542.1-201ENST00000608259 493 ntBASIC3.66□□□□□ -1.82
CUX2O14529 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CUX2O14529 AC008759.3-201ENST00000613300 508 ntBASIC3.66□□□□□ -1.82
CUX2O14529 AC095038.3-201ENST00000634439 195 ntBASIC3.66□□□□□ -1.82
CUX2O14529 AC091152.2-201ENST00000591628 2569 ntBASIC3.66□□□□□ -1.82
CUX2O14529 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.65□□□□□ -1.82
CUX2O14529 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CUX2O14529 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.65□□□□□ -1.83
CUX2O14529 Y_RNA.178-201ENST00000363832 102 ntBASIC3.65□□□□□ -1.83
CUX2O14529 RNU6-441P-201ENST00000384545 106 ntBASIC3.65□□□□□ -1.83
CUX2O14529 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.65□□□□□ -1.83
CUX2O14529 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.65□□□□□ -1.83
CUX2O14529 AC005517.2-201ENST00000424673 553 ntBASIC3.65□□□□□ -1.83
CUX2O14529 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.65□□□□□ -1.83
CUX2O14529 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.65□□□□□ -1.83
CUX2O14529 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.65□□□□□ -1.83
CUX2O14529 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.65□□□□□ -1.83
CUX2O14529 AC117532.1-201ENST00000514638 323 ntBASIC3.65□□□□□ -1.83
CUX2O14529 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.65□□□□□ -1.83
CUX2O14529 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.65□□□□□ -1.83
CUX2O14529 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.65□□□□□ -1.83
CUX2O14529 AC133794.1-201ENST00000602731 914 ntBASIC3.65□□□□□ -1.83
CUX2O14529 AL451074.6-201ENST00000608512 729 ntBASIC3.65□□□□□ -1.83
CUX2O14529 AC005156.1-201ENST00000613371 573 ntBASIC3.65□□□□□ -1.83
CUX2O14529 AC010297.1-201ENST00000623948 149 ntBASIC3.65□□□□□ -1.83
CUX2O14529 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CUX2O14529 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CUX2O14529 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CUX2O14529 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CUX2O14529 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.64□□□□□ -1.83
CUX2O14529 RNU6-207P-201ENST00000384137 107 ntBASIC3.64□□□□□ -1.83
CUX2O14529 RNU6-549P-201ENST00000384433 107 ntBASIC3.64□□□□□ -1.83
CUX2O14529 AL355615.1-201ENST00000406187 641 ntBASIC3.64□□□□□ -1.83
CUX2O14529 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.64□□□□□ -1.83
CUX2O14529 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.64□□□□□ -1.83
CUX2O14529 AL050341.1-201ENST00000447743 313 ntBASIC3.64□□□□□ -1.83
CUX2O14529 RPS15AP1-201ENST00000457423 391 ntBASIC3.64□□□□□ -1.83
CUX2O14529 RNU7-140P-201ENST00000459546 60 ntBASIC3.64□□□□□ -1.83
CUX2O14529 AP000873.1-201ENST00000463987 400 ntBASIC3.64□□□□□ -1.83
CUX2O14529 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.64□□□□□ -1.83
CUX2O14529 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.64□□□□□ -1.83
CUX2O14529 AC118282.2-201ENST00000508739 374 ntBASIC3.64□□□□□ -1.83
CUX2O14529 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms