Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CCNG2P1-201ENST00000549521 1000 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC007954.1-201ENST00000554198 494 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AL355836.1-201ENST00000555951 870 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AP001004.1-201ENST00000582468 324 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 MIR4276-201ENST00000584832 70 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AF038458.1-201ENST00000588406 262 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC008739.3-201ENST00000603262 127 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 PRELID3BP8-201ENST00000604148 295 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC004908.2-201ENST00000609090 574 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC188H7C350 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC188H7C350 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC188H7C350 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC188H7C350 SNORA70.4-201ENST00000365509 134 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC188H7C350 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CCDC188H7C350 MIR200C-201ENST00000384980 68 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 MIR514A1-201ENST00000385133 98 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AL354719.1-201ENST00000406535 843 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC188H7C350 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC188H7C350 AL593851.1-201ENST00000426171 157 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC188H7C350 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC188H7C350 AC004263.1-201ENST00000479327 332 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AC116347.2-201ENST00000514912 523 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 Y_RNA.717-201ENST00000517106 92 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC188H7C350 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC188H7C350 HIGD1AP1-201ENST00000550979 275 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 MIR2682-201ENST00000580305 110 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC188H7C350 VN1R90P-201ENST00000595717 726 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AC068790.3-201ENST00000602988 553 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AL353778.1-201ENST00000603149 408 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AL139344.1-201ENST00000605228 195 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC188H7C350 AP002791.1-201ENST00000623291 381 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 AL356266.1-201ENST00000623311 483 ntBASIC3.29□□□□□ -1.88
CCDC188H7C350 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC188H7C350 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC188H7C350 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC188H7C350 AL079305.1-201ENST00000623159 3008 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC188H7C350 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC188H7C350 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC188H7C350 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC188H7C350 RNU6-1077P-201ENST00000410506 102 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 RPL23AP39-201ENST00000415533 405 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AL353705.1-201ENST00000433468 480 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC188H7C350 RPL7P36-201ENST00000444633 681 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC188H7C350 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC188H7C350 AC135721.1-201ENST00000497954 479 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC188H7C350 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC188H7C350 AC006445.2-201ENST00000510061 472 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC188H7C350 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC188H7C350 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC188H7C350 AC124947.2-202ENST00000552735 133 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC188H7C350 OR4H12P-201ENST00000556269 907 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC188H7C350 MIR3944-201ENST00000581277 108 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 UBE2L4-201ENST00000587688 464 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC188H7C350 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC188H7C350 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC188H7C350 AC026790.2-201ENST00000606282 430 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AL158801.5-201ENST00000623123 465 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AC091965.5-201ENST00000624785 342 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC188H7C350 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.88
CCDC188H7C350 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC188H7C350 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
CCDC188H7C350 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.89
CCDC188H7C350 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.89
CCDC188H7C350 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC188H7C350 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC188H7C350 SDAD1P2-201ENST00000441308 2028 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC188H7C350 TPTE2P4-201ENST00000258589 1605 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC188H7C350 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC188H7C350 RNU6-223P-201ENST00000362830 107 ntBASIC3.27□□□□□ -1.89
CCDC188H7C350 RNU1-39P-201ENST00000383897 165 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms