Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 ZNF285B-201ENST00000561698 1767 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RNA5SP90-201ENST00000364801 99 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.396-201ENST00000383949 103 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RNU6-356P-201ENST00000384140 107 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.526-201ENST00000384572 110 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 MIR153-1-201ENST00000384914 90 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 HSPA8P15-201ENST00000401676 786 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL603908.1-201ENST00000406098 201 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RNA5SP178-201ENST00000410380 128 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL030996.1-201ENST00000411430 235 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC119751.6-201ENST00000416712 186 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL353621.1-201ENST00000418219 243 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 PGBD4P6-201ENST00000421501 610 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 UBE2D3P2-201ENST00000424409 445 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 CKS1BP6-201ENST00000424932 240 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 COX6CP13-201ENST00000428703 226 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL158071.1-201ENST00000430315 461 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RPS15AP10-201ENST00000432472 382 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 CEACAMP6-201ENST00000452007 574 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL583843.1-201ENST00000456070 346 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC012158.1-204ENST00000483430 465 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 MTND3P25-201ENST00000509243 135 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC008716.1-201ENST00000511084 513 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 SNORD46.2-201ENST00000516021 102 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RNU7-4P-201ENST00000516961 62 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 IGKV3D-34-201ENST00000522638 302 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC000068.2-201ENST00000608816 460 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 SDAD1P2-201ENST00000441308 2028 ntBASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHISA3A0PJX4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 MIR323A-201ENST00000362199 86 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.447-201ENST00000384184 113 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.512-201ENST00000384518 102 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 MIR578-201ENST00000384828 96 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AL445529.1-201ENST00000398713 389 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 RPL21P1-201ENST00000399532 476 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AL109941.1-201ENST00000401925 229 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 BX276092.3-201ENST00000424182 230 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 DYNLT3P2-201ENST00000442517 295 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 EEF1B2P6-201ENST00000445713 673 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 PPIAP20-201ENST00000449839 135 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AL445665.1-202ENST00000452436 324 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC018638.3-201ENST00000461273 132 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC108751.2-201ENST00000469993 231 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC105758.1-201ENST00000506038 399 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 ACA59.1-201ENST00000515966 143 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC012339.2-201ENST00000523996 453 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC008489.1-201ENST00000524271 483 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AL512329.2-201ENST00000607350 548 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC127024.6-201ENST00000621598 424 ntBASIC4.45□□□□□ -1.7
SHISA3A0PJX4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHISA3A0PJX4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms