Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 RPL30P5-201ENST00000494923 336 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC097462.2-201ENST00000504623 481 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 PCNAP1-201ENST00000505363 709 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC008885.2-201ENST00000509506 930 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 SCARNA17.1-201ENST00000516211 143 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 SCARNA17.2-201ENST00000516334 143 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 SNORA48.10-201ENST00000516965 160 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 SCARNA11.3-201ENST00000517276 130 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 MIR4319-201ENST00000577285 85 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 MIR5571-201ENST00000577998 113 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 MIR4429-201ENST00000580105 73 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC024220.1-201ENST00000603675 484 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC025588.2-201ENST00000604851 466 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AP002826.1-201ENST00000608835 315 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AP000254.1-201ENST00000609934 520 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC117490.2-201ENST00000610042 594 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 SCARNA17.4-201ENST00000614296 143 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 MIR6873-201ENST00000622788 63 ntBASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV13-2A0A0B4J235 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 RNU4-42P-201ENST00000364738 142 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AL512604.1-201ENST00000404812 257 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 Z99127.2-201ENST00000441426 334 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC004865.1-201ENST00000442276 1003 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC124916.1-201ENST00000444020 547 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 RPL7P12-201ENST00000446719 750 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 RPS3P1-201ENST00000456781 192 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 PPP1R2P5-201ENST00000457256 603 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC055855.1-201ENST00000489563 579 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC117525.1-201ENST00000515228 503 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 IGKV3-31-201ENST00000523109 329 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AP001646.1-201ENST00000527936 915 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 MIR5089-201ENST00000580047 84 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC078899.2-201ENST00000595282 212 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 VN1R92P-201ENST00000598511 928 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC007179.3-201ENST00000604976 235 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC073968.1-201ENST00000618594 637 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AL158801.5-201ENST00000623123 465 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC244517.12-201ENST00000623581 663 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC116618.1-201ENST00000634617 774 ntBASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV13-2A0A0B4J235 AC008568.2-201ENST00000623862 2313 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 XGY1-201ENST00000381172 446 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 RNU6-997P-201ENST00000384725 107 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC096664.2-201ENST00000411843 406 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC008280.1-201ENST00000418851 412 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC009237.8-201ENST00000445492 379 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AL589880.1-201ENST00000448271 287 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC233982.1-201ENST00000451247 436 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 RPL23AP3-201ENST00000453844 468 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 RNU6-420P-201ENST00000458780 107 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 BZW1P2-201ENST00000473537 826 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 SNORA31.13-201ENST00000516624 135 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 EIF4EP5-201ENST00000528228 640 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 MIR4419B-201ENST00000577260 68 ntBASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV13-2A0A0B4J235 AC017100.2-201ENST00000584628 355 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms