Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC023158.2-201ENST00000614876 543 ntBASIC3.39□□□□□ -1.87
NPC1L1Q9UHC9 AC092650.2-201ENST00000619984 902 ntBASIC3.39□□□□□ -1.87
NPC1L1Q9UHC9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.39□□□□□ -1.87
NPC1L1Q9UHC9 LINC02211-204ENST00000642024 1070 ntBASIC3.39□□□□□ -1.87
NPC1L1Q9UHC9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPC1L1Q9UHC9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPC1L1Q9UHC9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 RNU6-657P-201ENST00000383904 107 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC016769.3-201ENST00000396562 315 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 MTND4P13-201ENST00000402078 1023 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 MTATP6P20-201ENST00000414147 562 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 FCF1P1-201ENST00000432690 571 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 RPL36AP6-201ENST00000435770 321 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 RPS12P2-201ENST00000439728 269 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 MTCO2P25-201ENST00000447065 681 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC007327.1-201ENST00000447461 264 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 FDX1P2-201ENST00000450769 375 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 SSXP4-201ENST00000451349 245 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC104164.3-201ENST00000467363 1258 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 UBL5P3-201ENST00000475112 231 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC008549.1-201ENST00000512900 643 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 SCARNA1-201ENST00000517138 166 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 HMGB1P41-201ENST00000520234 440 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 EEF1B2P4-201ENST00000551398 348 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AL163153.1-201ENST00000554223 283 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 MTND3P13-201ENST00000574391 343 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC079089.3-201ENST00000603094 673 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC004987.4-201ENST00000603383 338 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AL121895.2-201ENST00000619558 447 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC064859.1-201ENST00000624741 174 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 RNU5D-1-201ENST00000363299 116 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 RNU6-413P-201ENST00000384115 107 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 RNU4-65P-201ENST00000410473 140 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC092427.1-201ENST00000439177 601 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 RPL17P49-201ENST00000443728 411 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 OR10V3P-201ENST00000525712 725 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AL391156.1-201ENST00000554965 554 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC010738.1-201ENST00000604970 987 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 MIR7843-201ENST00000622274 79 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 CTSLP2-204ENST00000629029 392 ntBASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NPC1L1Q9UHC9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AL136310.1-201ENST00000404926 654 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC099677.1-201ENST00000420575 175 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 ARPC3P2-201ENST00000457786 533 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 snoU13.4-201ENST00000458916 104 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 RN7SKP282-201ENST00000516824 299 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AP001646.1-201ENST00000527936 915 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 OR5BN1P-201ENST00000532955 829 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC005832.3-201ENST00000537929 631 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC128657.1-201ENST00000549459 145 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 SNORD53-201ENST00000579969 78 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 BNIP3P26-201ENST00000600827 554 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC080013.4-201ENST00000607624 649 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC040168.1-201ENST00000623594 991 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 AC120349.2-201ENST00000625002 298 ntBASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.37□□□□□ -1.87
NPC1L1Q9UHC9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms