Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL450338.1-201ENST00000407987 512 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 RNU2-15P-201ENST00000410692 191 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 VN1R51P-201ENST00000411675 945 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL592148.1-201ENST00000413568 445 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL645937.1-202ENST00000421799 937 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 MTATP6P4-201ENST00000427725 675 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC079780.1-201ENST00000428259 207 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL591719.1-201ENST00000444669 744 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL358794.1-201ENST00000445689 381 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 MLLT10P2-201ENST00000506434 249 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC006390.1-201ENST00000508068 283 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC026412.2-201ENST00000512270 1075 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 MTCO3P28-201ENST00000513351 515 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 SNORA31.1-201ENST00000515993 133 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 SNORA31.5-201ENST00000516190 133 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 RNU6-1225P-201ENST00000516336 65 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 COX6CP8-201ENST00000522620 226 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 FAM60DP-201ENST00000524174 632 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 HSPE1P3-201ENST00000559254 309 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC024153.1-201ENST00000603103 365 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL160237.3-201ENST00000604114 1013 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC245008.1-201ENST00000608123 476 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AC022509.4-201ENST00000621404 572 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AL353748.2-201ENST00000622148 471 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AP003399.1-201ENST00000637534 361 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC090740.1-201ENST00000623193 2262 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 SNRPEP3-201ENST00000338402 276 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 RNU5D-1-201ENST00000363299 116 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 SNORD88.1-201ENST00000408684 91 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 MIR1289-1-201ENST00000408836 144 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 ZNF885P-201ENST00000420174 1098 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 RPL7P30-201ENST00000420888 709 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 MRPS36P1-201ENST00000421291 307 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 USP9YP36-201ENST00000424581 829 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC087499.2-201ENST00000432861 149 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 RPS29P6-201ENST00000438196 145 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC105272.1-201ENST00000438604 198 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 MTND2P20-201ENST00000440805 661 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 RPL39P6-201ENST00000448289 150 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 NIPA2P5-201ENST00000452282 464 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 RPL23AP31-201ENST00000456160 467 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC113347.3-201ENST00000509113 148 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 RNA5SP356-201ENST00000515972 94 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 SNORA31.8-201ENST00000516327 108 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 RN7SKP31-201ENST00000516354 278 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC104986.1-201ENST00000517978 436 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AP001804.3-201ENST00000525146 880 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 SNRPGP16-201ENST00000533275 226 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 HIGD1AP17-201ENST00000554576 276 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC138761.3-201ENST00000579993 334 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 VN1R90P-201ENST00000595717 726 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 DUXAP4-201ENST00000603046 613 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AP001330.4-201ENST00000604350 154 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC064807.4-201ENST00000607201 407 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AL138478.1-201ENST00000612252 832 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AL020991.1-201ENST00000612314 373 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 MIR6733-201ENST00000635723 61 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 AC068137.4-201ENST00000638485 296 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
CLIP2Q9UDT6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.34□□□□□ -1.87
CLIP2Q9UDT6 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms