Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC080125.1-201ENST00000414888 684 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 AL590632.1-201ENST00000424289 371 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTN3Q9P232 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 RPL37P6-202ENST00000464216 403 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC117503.1-201ENST00000472241 394 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC010655.3-201ENST00000478818 450 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTN3Q9P232 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC026801.2-201ENST00000515352 425 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 RNU6-352P-201ENST00000516908 107 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC090151.1-201ENST00000520784 730 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 CR381572.2-201ENST00000624852 397 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 MIR4275-201ENST00000636486 87 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 AL731532.2-201ENST00000623542 1953 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTN3Q9P232 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.34□□□□□ -1.56
CNTN3Q9P232 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 CDC27P3-201ENST00000635418 1910 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 DEFB109C-201ENST00000382575 264 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 DEFB109B-201ENST00000382656 264 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 Y_RNA.645-201ENST00000391229 102 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC013442.1-201ENST00000397347 228 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 RNA5SP113-201ENST00000410486 84 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AL645568.3-201ENST00000433683 316 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC008264.1-201ENST00000447612 367 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 RPL23AP56-201ENST00000460778 453 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 RPL31P60-201ENST00000478450 367 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC022493.2-201ENST00000506122 481 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 RNU6-677P-201ENST00000516914 101 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AP003385.6-201ENST00000531603 374 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC100778.3-201ENST00000580060 1750 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 AC004817.4-201ENST00000602396 3625 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 SDAD1P1-202ENST00000524156 2051 ntBASIC5.33□□□□□ -1.56
CNTN3Q9P232 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTN3Q9P232 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CNTN3Q9P232 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC074029.4-201ENST00000624796 1859 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 RNU6-989P-201ENST00000362756 107 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 SNORA73.1-201ENST00000363107 205 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 RNU6-238P-201ENST00000363313 106 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 Y_RNA.152-201ENST00000363578 100 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 SNORA63.7-201ENST00000365579 123 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 RNU6-190P-201ENST00000384154 102 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 SNORA41-201ENST00000384675 132 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 MIR153-1-201ENST00000384914 90 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTN3Q9P232 RNA5SP56-201ENST00000410277 118 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 RNU6-101P-201ENST00000410323 104 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AL391219.1-201ENST00000422570 483 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC016712.1-201ENST00000431088 378 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 MRPS18BP2-201ENST00000434310 759 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 CYCSP43-201ENST00000438233 310 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC000111.2-201ENST00000448200 210 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AURKAPS2-201ENST00000454983 333 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.32□□□□□ -1.56
CNTN3Q9P232 Y_RNA.689-201ENST00000516589 107 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 CDH12P4-201ENST00000517835 295 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 CDH12P3-201ENST00000517935 295 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 CDH12P1-201ENST00000518435 295 ntBASIC5.32□□□□□ -1.56
CNTN3Q9P232 AP005902.1-201ENST00000521358 186 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms