Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 RN7SL170P-201ENST00000487098 295 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 RNU6-1143P-201ENST00000516125 104 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 AC012119.1-201ENST00000603184 222 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 AC006254.3-201ENST00000603353 884 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 AC174048.1-201ENST00000603389 144 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 IGHV3-29-201ENST00000604817 344 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 AC020634.1-201ENST00000608701 549 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 MIR8062-201ENST00000621515 85 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 AL691477.1-201ENST00000624398 162 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 AL445487.1-201ENST00000415694 1580 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 RNU6-874P-201ENST00000362390 105 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 RNU6-371P-201ENST00000364283 108 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 RNA5SP284-201ENST00000384547 118 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 MT-TC-201ENST00000387405 66 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 RNU6-821P-201ENST00000390995 107 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 RPL21P1-201ENST00000399532 476 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 RNA5SP56-201ENST00000410277 118 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC115283.1-201ENST00000427353 400 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 HMGB1P9-201ENST00000429856 646 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 AL645568.3-201ENST00000433683 316 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 PTMAP6-201ENST00000439110 327 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC000111.2-201ENST00000448200 210 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC010683.1-201ENST00000473673 378 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC007998.1-201ENST00000474156 672 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 RPL21P103-201ENST00000479921 488 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 VN1R105P-201ENST00000486595 910 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC068781.1-201ENST00000488231 618 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AL136038.1-201ENST00000497246 351 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC092349.1-201ENST00000504903 310 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 SNORD46.2-201ENST00000516021 102 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 CDH12P4-201ENST00000517835 295 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 CDH12P3-201ENST00000517935 295 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 CDH12P1-201ENST00000518435 295 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 AC131281.1-201ENST00000522984 164 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 SUB1P3-201ENST00000564581 315 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 SNORA74C-1-201ENST00000580726 201 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.86□□□□□ -1.63
SSU72Q9NP77 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 SOCS5P3-201ENST00000425115 1576 ntBASIC4.86□□□□□ -1.63
SSU72Q9NP77 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSU72Q9NP77 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSU72Q9NP77 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 RNA5SP183-201ENST00000362452 119 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 Y_RNA.380-201ENST00000365663 111 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 RNU4-70P-201ENST00000384579 139 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC096664.2-201ENST00000411843 406 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC097713.2-201ENST00000430199 356 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 RPS15AP10-201ENST00000432472 382 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 DYNLT3P2-201ENST00000442517 295 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 NEFMP1-201ENST00000443423 1006 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC002553.2-201ENST00000453217 340 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 CEACAMP4-201ENST00000457676 421 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC084198.1-201ENST00000477747 402 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 RN7SL547P-201ENST00000490793 290 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 AC026979.1-201ENST00000492525 396 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 RN7SL101P-201ENST00000496350 279 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.85□□□□□ -1.63
SSU72Q9NP77 RNY3P15-201ENST00000516297 97 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms