Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 RPL21P67-201ENST00000402896 478 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 RNA5SP56-201ENST00000410277 118 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 RNU2-43P-201ENST00000410306 190 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 RNU6-325P-201ENST00000411132 105 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AC007098.1-201ENST00000420122 367 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 PRDX3P3-201ENST00000447765 522 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AL162739.1-201ENST00000450606 307 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 RPS11P1-201ENST00000451072 473 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 CEACAMP6-201ENST00000452007 574 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AL356981.1-201ENST00000454879 684 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 RPS4XP20-201ENST00000505751 772 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AMZ2P1-203ENST00000565833 850 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 MIR548AC-201ENST00000585049 88 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 AC006023.2-201ENST00000609916 167 ntBASIC4.73□□□□□ -1.65
GSX1Q9H4S2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GSX1Q9H4S2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 LINC01963-201ENST00000562038 3148 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 RNU1-43P-201ENST00000365052 165 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 Y_RNA.555-201ENST00000384673 110 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 SNORA19-201ENST00000384737 128 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AL513475.1-201ENST00000406602 315 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 RAC1P3-201ENST00000416129 580 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AC090774.1-201ENST00000435925 246 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 TPT1P12-201ENST00000448968 492 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 MED28P2-201ENST00000475771 317 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 NIP7P2-201ENST00000485801 544 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 MRPS33P2-201ENST00000507850 322 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 GMPSP1-201ENST00000514075 579 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 RNU6-1095P-201ENST00000516148 108 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 RN7SKP288-201ENST00000516227 268 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 RNU6-914P-201ENST00000516749 109 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 SNORA81.3-201ENST00000517283 198 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AC087369.1-201ENST00000520775 996 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 SNRPGP16-201ENST00000533275 226 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AL355877.2-201ENST00000603670 358 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 MIR3976-201ENST00000606807 139 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 ZNF285B-201ENST00000561698 1767 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PHKBP1-201ENST00000450951 1951 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GSX1Q9H4S2 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.72□□□□□ -1.65
GSX1Q9H4S2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
GSX1Q9H4S2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
GSX1Q9H4S2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.71□□□□□ -1.66
GSX1Q9H4S2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GSX1Q9H4S2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
GSX1Q9H4S2 AL157777.2-201ENST00000258070 137 ntBASIC4.71□□□□□ -1.66
GSX1Q9H4S2 AC126755.2-208ENST00000327792 462 ntBASIC4.71□□□□□ -1.66
GSX1Q9H4S2 AC138969.1-213ENST00000331436 462 ntBASIC4.71□□□□□ -1.66
GSX1Q9H4S2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
GSX1Q9H4S2 SNORA62-201ENST00000365493 153 ntBASIC4.71□□□□□ -1.66
GSX1Q9H4S2 Y_RNA.416-201ENST00000384014 113 ntBASIC4.71□□□□□ -1.66
GSX1Q9H4S2 Y_RNA.785-201ENST00000384290 109 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms