Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-1Q9BYR8 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-1Q9BYR8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-1Q9BYR8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-1Q9BYR8 AC004925.1-201ENST00000624256 2706 ntBASIC3.19□□□□□ -1.9
KRTAP3-1Q9BYR8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AL359955.1-201ENST00000455242 3275 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AL450326.2-201ENST00000421913 1962 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SAMMSON-226ENST00000642089 1582 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU6-249P-201ENST00000363016 102 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RNA5SP514-201ENST00000363717 111 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 Y_RNA.179-201ENST00000363844 90 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RNA5SP234-201ENST00000363916 119 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RNA5SP355-201ENST00000365317 135 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SNORA66-201ENST00000384792 133 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 MIR187-201ENST00000385062 109 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU6-763P-201ENST00000390865 106 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU2-5P-201ENST00000410533 180 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 BPY2DP-201ENST00000422208 265 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SNRPEP9-201ENST00000436794 238 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AL451050.1-201ENST00000450126 415 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SNRPGP7-201ENST00000469016 106 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC115990.1-201ENST00000526957 301 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 HSPE1P4-201ENST00000550617 308 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC090877.1-201ENST00000561418 344 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC127455.1-201ENST00000565496 145 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RN7SL311P-201ENST00000579858 306 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 RPL29P33-201ENST00000587474 316 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC019159.1-201ENST00000605094 187 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC114477.1-201ENST00000605097 605 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 TP53TG1_2.1-201ENST00000611226 182 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 MIR6762-201ENST00000613340 86 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC02495-203ENST00000636704 242 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 CUL1P1-201ENST00000509510 2425 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 TUBBP10-201ENST00000427668 1301 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 AC004076.2-201ENST00000620532 3323 ntBASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms