Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 MARK2P4-201ENST00000503381 2380 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC009779.8-201ENST00000641684 4384 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR302B-201ENST00000362188 73 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-288P-201ENST00000363690 104 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-289P-201ENST00000364093 107 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.290-201ENST00000364879 114 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORA36A-201ENST00000384221 132 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-1127P-201ENST00000384580 107 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-14P-201ENST00000384630 106 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-768P-201ENST00000384683 107 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-700P-201ENST00000391043 107 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 SPTLC1P2-201ENST00000407089 121 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORA19.1-201ENST00000410656 129 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU4-46P-201ENST00000410818 138 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU2-32P-201ENST00000411193 191 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 CYCSP19-201ENST00000411715 316 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 SDHDP6-201ENST00000414693 480 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 TMSB10P2-201ENST00000416049 131 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL21P109-201ENST00000422213 475 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL12P17-201ENST00000432393 498 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AL159987.2-201ENST00000432754 307 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 DAP3P1-201ENST00000441522 278 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL23AP43-201ENST00000446445 471 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RPS20P10-201ENST00000451209 253 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC079804.1-201ENST00000461922 436 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC034236.1-201ENST00000469891 373 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RPS18P6-201ENST00000476880 458 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RN7SL826P-201ENST00000479724 288 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 TRBV5-2-201ENST00000489095 273 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC072052.1-201ENST00000496556 306 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RPS17P5-201ENST00000498293 408 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC091868.1-201ENST00000508746 304 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC096754.1-201ENST00000508904 818 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC091874.1-201ENST00000511402 339 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-523P-201ENST00000516304 54 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-941P-201ENST00000516346 108 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AP006245.2-201ENST00000522004 300 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AK6P2-201ENST00000549020 471 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC126177.5-201ENST00000549599 178 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC126615.2-201ENST00000553003 515 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC044860.2-201ENST00000561005 179 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC007012.1-201ENST00000567192 175 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AL158827.2-201ENST00000602494 330 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR8080-201ENST00000622224 89 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 snoU18.1-201ENST00000629629 71 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AL691447.3-201ENST00000635020 330 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 U6.115-201ENST00000636045 103 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AC092070.2-203ENST00000598377 3644 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 DOCK11P1-201ENST00000553480 5932 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AP000866.6-201ENST00000638898 3579 ntBASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-3Q9BYR4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms