Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RNA5SP431-201ENST00000410312 120 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNU6-121P-201ENST00000410525 99 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 GPS2P1-201ENST00000411761 986 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AP000275.1-201ENST00000411943 390 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 CYP4F29P-201ENST00000420685 446 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RPL12P12-201ENST00000424633 501 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL589794.1-201ENST00000424971 390 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC091390.3-201ENST00000426478 338 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RPL3P11-201ENST00000434028 1146 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL022324.2-201ENST00000434827 780 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC104332.1-201ENST00000440471 797 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL078601.1-201ENST00000444542 271 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 PTMAP3-201ENST00000447474 330 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL513124.1-201ENST00000450410 614 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RPL12P39-201ENST00000455456 496 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL445433.1-201ENST00000457507 257 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RN7SL145P-201ENST00000469955 296 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RN7SL799P-201ENST00000475891 298 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RPS16P9-201ENST00000477220 427 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC083795.1-201ENST00000491760 320 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 Z99943.2-201ENST00000507585 266 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC093878.1-201ENST00000515630 432 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP206-201ENST00000516703 121 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNU6-1212P-201ENST00000517023 104 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SNORA31.20-201ENST00000517111 133 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SNORA81.3-201ENST00000517283 198 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 IGKV2-23-201ENST00000518729 323 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AP004609.2-201ENST00000532177 190 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 OR7E1P-201ENST00000533891 958 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC004024.1-201ENST00000549244 247 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SYF2P1-201ENST00000550658 413 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 MED28P6-201ENST00000558776 231 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 MIR5682-201ENST00000584864 76 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC073046.2-201ENST00000604756 527 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RPL17P3-201ENST00000605695 525 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC090132.2-201ENST00000615881 347 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 MIR6133-201ENST00000617057 108 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SCARNA4-201ENST00000629045 128 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 U4.7-201ENST00000638126 106 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC125336.1-201ENST00000508893 2827 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SCN1A-220ENST00000641603 12506 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC009962.1-201ENST00000567327 3813 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms