Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC004972.1-201ENST00000623934 2209 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RN7SKP224-201ENST00000364140 325 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU1-63P-201ENST00000383902 164 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.384-201ENST00000383909 102 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU6-641P-201ENST00000384006 107 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU6-356P-201ENST00000384140 107 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU6-831P-201ENST00000384548 107 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU6-903P-201ENST00000391270 109 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 MIR1193-201ENST00000408109 78 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU4-26P-201ENST00000410270 107 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AL353729.1-201ENST00000425044 720 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 MRPS18BP2-201ENST00000434310 759 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 DHFRP3-201ENST00000455595 559 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AL590639.1-201ENST00000456484 337 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 PPP1R2P5-201ENST00000457256 603 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU7-182P-201ENST00000459009 62 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RPL21P103-201ENST00000479921 488 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC116562.3-201ENST00000506136 177 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC092436.1-201ENST00000506450 503 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RNU6-64P-201ENST00000517119 105 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RN7SKP256-201ENST00000517201 314 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 FAM60DP-201ENST00000524174 632 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 DEFB108D-201ENST00000527787 222 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC068587.5-201ENST00000528506 175 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AP005435.4-201ENST00000529514 284 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 RN7SL176P-201ENST00000580352 264 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 MIR4775-201ENST00000581168 75 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC079587.1-201ENST00000603846 277 ntBASIC4.2□□□□□ -1.74
NDC1Q9BTX1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDC1Q9BTX1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 LARP1BP1-201ENST00000506036 1359 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 MIR331-201ENST00000362302 94 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RNU4-66P-201ENST00000365199 138 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RNU6-38P-201ENST00000384085 107 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AL583835.1-201ENST00000399570 407 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AL109755.1-201ENST00000401791 649 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AL136372.1-201ENST00000403060 228 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RNU2-39P-201ENST00000410604 198 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RNA5SP107-201ENST00000411358 122 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 BEND7P1-201ENST00000422058 457 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC018630.2-202ENST00000422992 927 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 NUTF2P7-201ENST00000453086 375 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RNU6-333P-201ENST00000459117 107 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC096576.1-201ENST00000489014 359 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 PARP4P3-201ENST00000510265 317 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 RN7SKP13-201ENST00000515933 244 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.665-201ENST00000516177 98 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC134698.5-201ENST00000519444 336 ntBASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.19□□□□□ -1.74
NDC1Q9BTX1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms