Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 BX510359.1-201ENST00000456973 237 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 RN7SL863P-201ENST00000462370 296 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC106872.3-201ENST00000495104 446 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 RNU6-711P-201ENST00000517255 106 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC012435.1-202ENST00000568772 240 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC002400.1-201ENST00000569310 726 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC136618.2-201ENST00000575091 400 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC018714.1-201ENST00000605028 208 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC106028.5-201ENST00000610332 395 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AL591516.1-201ENST00000611326 274 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC002550.2-201ENST00000621246 394 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 MTND4P16-201ENST00000466108 1367 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC092447.10-201ENST00000620607 1652 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 UBE2FP3-201ENST00000436366 524 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC004866.2-201ENST00000438285 481 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AL831737.1-201ENST00000441288 271 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC112653.1-201ENST00000443851 386 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC021382.1-201ENST00000483523 359 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 VN1R104P-201ENST00000505115 1009 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 POU5F1P7-201ENST00000508759 541 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 RNU6-1129P-201ENST00000515964 104 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC013828.2-201ENST00000532487 235 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC013444.2-201ENST00000603317 787 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AL158211.4-201ENST00000606988 584 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC097520.1-201ENST00000624435 385 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC079416.3-201ENST00000624479 549 ntBASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CCM2Q9BSQ5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 RN7SKP266-201ENST00000410232 287 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 MTCYBP39-201ENST00000437562 491 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 FTH1P1-201ENST00000437933 532 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AC009969.1-201ENST00000438726 172 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 RPL17P49-201ENST00000443728 411 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AP000542.1-201ENST00000448473 371 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 RNU7-125P-201ENST00000458760 62 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 RPS3AP22-201ENST00000488297 769 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 CBX3P3-201ENST00000508108 532 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AC087276.1-201ENST00000529659 480 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 DUXAP5-201ENST00000529668 529 ntBASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.11□□□□□ -1.91
CCM2Q9BSQ5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms