Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 U3.53-201ENST00000628922 216 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 ZNF807-201ENST00000328088 1707 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AL139276.1-201ENST00000311910 1001 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 POLHP1-201ENST00000411806 470 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 RAC1P6-201ENST00000423911 575 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AC096644.2-201ENST00000429278 159 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 Z98949.2-201ENST00000440996 144 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 RNA5SP103-201ENST00000459503 118 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AL591473.1-201ENST00000464297 313 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AL137161.1-201ENST00000532231 390 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 NF1P5-201ENST00000588287 448 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AP005019.3-201ENST00000620418 560 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AL138713.1-201ENST00000624026 2130 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AL669831.3-213ENST00000636676 183 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SYNGAP1Q96PV0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.135-201ENST00000363439 95 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.176-201ENST00000363815 109 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 SNORA62.3-201ENST00000365110 153 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.364-201ENST00000365532 101 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 Z98745.1-201ENST00000402553 494 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AL359643.1-201ENST00000404109 423 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 MIR1271-201ENST00000408537 86 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 RN7SKP177-201ENST00000410567 355 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.646-201ENST00000410980 101 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 MCFD2P1-201ENST00000417812 300 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AF228730.2-201ENST00000438784 848 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC007016.1-201ENST00000512110 244 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 TBCAP3-201ENST00000512475 312 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-123P-201ENST00000516163 102 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 MIR3939-201ENST00000582614 106 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC006157.1-201ENST00000611750 366 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC007485.1-201ENST00000616755 206 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 PISRT1.1-201ENST00000616930 107 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AL162373.1-201ENST00000620433 407 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 Z69720.2-201ENST00000624755 279 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 AP001642.1-201ENST00000624727 2117 ntBASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SYNGAP1Q96PV0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-238P-201ENST00000363313 106 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 RNU1-130P-201ENST00000363930 160 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 SNORD115-7-201ENST00000365306 82 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.476-201ENST00000384347 108 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-1222P-201ENST00000384615 107 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.576-201ENST00000384781 102 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 EIF4E2P1-201ENST00000393781 255 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms