Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 RNU6-1119P-201ENST00000384349 108 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 Y_RNA.548-201ENST00000384656 105 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 SNORA40.3-201ENST00000390964 122 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 RPL32P23-201ENST00000397237 405 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 DEFB108C-201ENST00000400154 252 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 RPS20P2-201ENST00000402520 389 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 Y_RNA.598-201ENST00000410480 95 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC007899.1-201ENST00000412776 775 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 RPL22P17-201ENST00000438729 315 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC108734.1-201ENST00000439549 399 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 MTND1P27-201ENST00000451117 902 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 SSXP4-201ENST00000451349 245 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AL133162.1-201ENST00000463228 453 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AP003497.1-201ENST00000528472 562 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC022878.1-201ENST00000530684 149 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 SEPT7P9-203ENST00000604116 343 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AC122108.2-201ENST00000611946 526 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 AL513302.2-201ENST00000562313 1842 ntBASIC3.33□□□□□ -1.88
SLC47A1Q96FL8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC244517.1-201ENST00000606030 2086 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 MFSD8-236ENST00000641509 4050 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 Y_RNA.46-201ENST00000362695 102 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 U3.20-201ENST00000390909 217 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AL583834.1-201ENST00000406943 343 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 RN7SKP156-201ENST00000410308 342 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 RNU6-712P-201ENST00000410558 100 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 Y_RNA.608-201ENST00000410647 95 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 RNU2-47P-201ENST00000410649 186 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 RNU2-16P-201ENST00000410712 136 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 USP9YP13-201ENST00000417797 480 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 MTND4LP10-201ENST00000435146 291 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 RPS29P7-201ENST00000439662 171 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AL022238.1-201ENST00000442557 355 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC112653.1-201ENST00000443851 386 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AP1S2P1-201ENST00000457344 379 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 NPM1P41-201ENST00000512920 831 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC017037.2-201ENST00000513850 890 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 MIR5685-201ENST00000579080 79 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC006130.2-201ENST00000586202 326 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 UBE2L4-201ENST00000587688 464 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 RNU1-30P-201ENST00000606575 163 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC104073.3-201ENST00000610942 955 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC138749.5-201ENST00000611461 208 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC116165.2-201ENST00000616705 206 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AL356585.4-201ENST00000623078 1229 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AL158801.5-201ENST00000623123 465 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AC110801.1-201ENST00000623590 212 ntBASIC3.32□□□□□ -1.88
SLC47A1Q96FL8 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
SLC47A1Q96FL8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms