Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 MIR4255-201ENST00000579351 72 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 MIR4636-201ENST00000582271 80 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AP003117.1-201ENST00000602771 554 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RNU6-302P-201ENST00000365249 107 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 SNORA40.6-201ENST00000391153 128 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 CYCSP48-201ENST00000417124 323 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 HMGN2P18-201ENST00000450680 270 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC098483.2-201ENST00000603158 454 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC244517.3-201ENST00000616254 1235 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RBM12B-AS1-201ENST00000623283 653 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 Y_RNA.55-201ENST00000362797 102 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 SNORA2A-201ENST00000383885 135 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AL451074.5-201ENST00000415894 435 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 GTF2IP23-201ENST00000423746 351 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 PPIAP17-201ENST00000438507 471 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 CBX3P5-201ENST00000552017 521 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC141257.3-201ENST00000572906 215 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 MIR5089-201ENST00000580047 84 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC007229.1-201ENST00000590455 412 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC093788.1-201ENST00000609356 927 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 Pinc.1-201ENST00000616452 154 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC103858.2-201ENST00000621471 543 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 MTND4P23-201ENST00000447723 1363 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RNY4P19-201ENST00000362530 96 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RPS26P40-201ENST00000435209 294 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AL031663.1-201ENST00000437445 219 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 SNORA31.11-201ENST00000516528 139 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC023813.2-201ENST00000564321 469 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AL353746.1-201ENST00000566293 6881 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AL355379.1-201ENST00000405542 640 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AGGF1P5-201ENST00000567900 919 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 CR381653.2-201ENST00000624041 768 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 CR382285.2-201ENST00000624662 1495 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 CR848007.1-201ENST00000442354 1699 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC138915.1-201ENST00000565427 1685 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 XKRYP4-201ENST00000414395 483 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 USP9YP27-201ENST00000418455 438 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 YWHAEP5-201ENST00000431545 765 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 XKRYP5-201ENST00000449659 483 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AL121769.1-201ENST00000469473 401 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 RPS23P3-201ENST00000470993 430 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AL356575.1-201ENST00000603008 283 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AL645944.1-201ENST00000603857 493 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 RNU6-1104P-201ENST00000384723 104 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC025445.1-201ENST00000502728 300 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC123904.3-201ENST00000547218 814 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 SNORD53B-201ENST00000577887 78 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 RNU6-1080P-201ENST00000383982 107 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 RNU6-700P-201ENST00000391043 107 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 MTATP6P11-201ENST00000428071 670 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC233702.1-201ENST00000482905 502 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 IMMP1LP2-201ENST00000552954 492 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC108676.2-201ENST00000605225 163 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AL161722.3-201ENST00000605789 2983 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 SET-203ENST00000372688 801 ntTSL 2 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 SKINT1L-201ENST00000401057 817 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 JTBP1-201ENST00000441314 247 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms